Definition | Mycobacterium tuberculosis F11, complete genome. |
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Accession | NC_009565 |
Length | 4,424,435 |
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The map label for this gene is 148823291
Identifier: 148823291
GI number: 148823291
Start: 2347935
End: 2348906
Strand: Reverse
Name: 148823291
Synonym: TBFG_12112
Alternate gene names: NA
Gene position: 2348906-2347935 (Counterclockwise)
Preceding gene: 148823294
Following gene: 148823290
Centisome position: 53.09
GC content: 64.92
Gene sequence:
>972_bases ATGCTGGCCACCCTGTCCCAAATCCGGGCATGGAGCACCGAGCACCTTATCGATGCGGCCGGCTACTGGACCGAAACCGC GGATCGGTGGGAAGACGTGTTTCTGCAGATGCGAAACCAGGCCCATGCCATCGCCTGGAATGGCGCCGGGGGCGACGGGC TGCGACAACGAACCCGAGCTGACTTCTCAACGGTCAGTGGCATAGCCGACCAGCTGCGGAGAGCAGCCACGATCGCGCGC AACGGCGCCGGCACTATCGACGCGGCACAACGAAGAGTTATGTATGCCGTAGAGGACGCCCAGGACGCCGGTTTCAACGT CGGTGAAGACCTATCGGTCACCGACACCAAAACGACGCAGCCGGCTGCAGTGCAGGCCGCTCGACTAGCTCAGGCTCAGG CGTTGGCCGGTGACATCCGCTTACGTGTCGGGCAACTGGTTGCGGCGGAGAACGAGGTGTCCGGTCAGCTCGCCGCGACC ACCGGTGATGTGGGAAATGTCCGCTTCGCGGGCGCCCCGGTTGTTGCCCACAGCGCGGTTCAGCTAGTCGACTTCTTCAA ACAAGACGGCCCAACACCTCCACCGCCAGGAGCGCCACACCCGTCCGGTGGAGCCGACGGACCGTACTCCGATCCGATCA CTTCAATGATGCTGCCACCGGCCGGGACAGAGGCACCCGTATCAGACGCGACCAAACGGTGGGTGGACAACATGGTCAAC GAGCTGGCCGCTAGGCCGCCGGATGACCCCATCGCGGTGGAGGCGCGCCGGCTGGCGTTTCAAGCTCTGCACCGGCCATG TAACAGCGCGGAGTGGACGGCGGCTGTTGCGGGTTTCGCAGGATCATCGGCTGGCGTAGTTGGGACCGCCCTAGCAATTC CGGCCGGCCCTGCCGACTGGGCACTACTTGGCGCCGCCTTACTGGGGGTTGGCGGATCGGGAGCGGCGGTGGTCAACTGT GCCACCAAGTAG
Upstream 100 bases:
>100_bases TACGGCTACCGGGGTGGCTGCCGCGGCCGCAGCTTACGCCCATCAAGAGGCAACTGCGGCGAGCGAGATGGCCGCGGTGA CGCAGGTGACGGTGGTTTAG
Downstream 100 bases:
>100_bases CGCGACTCCCGTTGTCGTCTTCAGCGTTGCCGTCGTGGTTGTCTGCCTCATCGGCGGTGTCGCAGGCTCCCTGTGGCCTC GGCCAGCGGGACGGCTCAGG
Product: transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRADFSTVSGIADQLRRAATIAR NGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQPAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAAT TGDVGNVRFAGAPVVAHSAVQLVDFFKQDGPTPPPPGAPHPSGGADGPYSDPITSMMLPPAGTEAPVSDATKRWVDNMVN ELAARPPDDPIAVEARRLAFQALHRPCNSAEWTAAVAGFAGSSAGVVGTALAIPAGPADWALLGAALLGVGGSGAAVVNC ATK
Sequences:
>Translated_323_residues MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRADFSTVSGIADQLRRAATIAR NGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQPAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAAT TGDVGNVRFAGAPVVAHSAVQLVDFFKQDGPTPPPPGAPHPSGGADGPYSDPITSMMLPPAGTEAPVSDATKRWVDNMVN ELAARPPDDPIAVEARRLAFQALHRPCNSAEWTAAVAGFAGSSAGVVGTALAIPAGPADWALLGAALLGVGGSGAAVVNC ATK >Mature_323_residues MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRADFSTVSGIADQLRRAATIAR NGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQPAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAAT TGDVGNVRFAGAPVVAHSAVQLVDFFKQDGPTPPPPGAPHPSGGADGPYSDPITSMMLPPAGTEAPVSDATKRWVDNMVN ELAARPPDDPIAVEARRLAFQALHRPCNSAEWTAAVAGFAGSSAGVVGTALAIPAGPADWALLGAALLGVGGSGAAVVNC ATK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2077_MYCTU (P64933)
Other databases:
- EMBL: BX842578 - EMBL: AE000516 - PIR: H70765 - RefSeq: NP_216593.1 - RefSeq: NP_336603.1 - EnsemblBacteria: EBMYCT00000002246 - EnsemblBacteria: EBMYCT00000071146 - GeneID: 887785 - GeneID: 926641 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2137 - KEGG: mtu:Rv2077c - TIGR: MT2137 - TubercuList: Rv2077c - GeneTree: EBGT00050000015013 - HOGENOM: HBG569580 - ProtClustDB: CLSK791610 - GO: GO:0005829
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33321; Mature: 33321
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x194255a4)-; HASH(0x1b7f20ac)-;
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRA CCCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHH DFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQ HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECHHHCCCCCCCCCCCCCCCCCC PAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAPVVAHSAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCCCHHHHHHH QLVDFFKQDGPTPPPPGAPHPSGGADGPYSDPITSMMLPPAGTEAPVSDATKRWVDNMVN HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHH ELAARPPDDPIAVEARRLAFQALHRPCNSAEWTAAVAGFAGSSAGVVGTALAIPAGPADW HHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHEECCCCCHHH ALLGAALLGVGGSGAAVVNCATK HHHHHHHHCCCCCCCEEEEECCH >Mature Secondary Structure MLATLSQIRAWSTEHLIDAAGYWTETADRWEDVFLQMRNQAHAIAWNGAGGDGLRQRTRA CCCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHH DFSTVSGIADQLRRAATIARNGAGTIDAAQRRVMYAVEDAQDAGFNVGEDLSVTDTKTTQ HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECHHHCCCCCCCCCCCCCCCCCC PAAVQAARLAQAQALAGDIRLRVGQLVAAENEVSGQLAATTGDVGNVRFAGAPVVAHSAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCCCHHHHHHH QLVDFFKQDGPTPPPPGAPHPSGGADGPYSDPITSMMLPPAGTEAPVSDATKRWVDNMVN HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHH ELAARPPDDPIAVEARRLAFQALHRPCNSAEWTAAVAGFAGSSAGVVGTALAIPAGPADW HHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHEECCCCCHHH ALLGAALLGVGGSGAAVVNCATK HHHHHHHHCCCCCCCEEEEECCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036