Click here to switch to the map view.

The map label for this gene is ppe54 [H]

Identifier: 148660120

GI number: 148660120

Start: 425506

End: 426063

Strand: Reverse

Name: ppe54 [H]

Synonym: MRA_0363

Alternate gene names: 148660120

Gene position: 426063-425506 (Counterclockwise)

Preceding gene: 148660121

Following gene: 148660112

Centisome position: 9.64

GC content: 61.65

Gene sequence:

>558_bases
TTGCGGGTGTCGGTCTGCGTGATCTACATCCCTTTCAAGGGGTGTGTAAAGCATGTCTCGGTCACCATACCCATCACCAC
CGAACATCTCGGCCCCTACGAAATCGATGCCAGCACGATCAACCCCGACCAGCCCATCGACACGGCTTTCACCCAAACCC
TCGATTTCGCCGGCAGCGGCACCGTGGGCGCGTTCCCCTTCGGCTTCGGCTGGCAGCAGAGCCCGGGATTCTTCAACTCG
ACCACAACCCCGTCGTCGGGCTTCTTCAACTCCGGCGCCGGTGGCGCATCGGGCTTCCTCAACGACGCCGCAGCCGCCGT
GTCGGGCCTGGGAAACGTCTTCACCGAGACTTCGGGCTTCTTCAATGCTGGCGGCGTAGGGAATTCGGGCTTCCAAAACT
TCGGCAACCTGCTGTCGGGCTGGGCGAACCTAGGCAATACCGTCTCCGGTTTCTACAACACGAGCATGCTGGACCTCGCG
ACCCAAGCCCTTATCTCCGGCTTCGGCAACCACGGAGCCCGACTCTCCGGCATCCTCAACAACGGTAGCGGACCCTAA

Upstream 100 bases:

>100_bases
AGCTACGACAGGTTCCAACATTGAAATACCCATCGAGGGCGACATCAACGCCATCACCCAGGACGCGTTCACTATTGACG
AATTCGAAATACCCATCAAG

Downstream 100 bases:

>100_bases
CTCCCCCGCTACGCGCGCTCGCTCACCGGCTGGTGCCAACTGCGCCGTTCGCTCCCCCGCTACGCGCGCTCGCTCACCGG
CTGGTGCCAACTGCGCCGTT

Product: PPE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MRVSVCVIYIPFKGCVKHVSVTIPITTEHLGPYEIDASTINPDQPIDTAFTQTLDFAGSGTVGAFPFGFGWQQSPGFFNS
TTTPSSGFFNSGAGGASGFLNDAAAAVSGLGNVFTETSGFFNAGGVGNSGFQNFGNLLSGWANLGNTVSGFYNTSMLDLA
TQALISGFGNHGARLSGILNNGSGP

Sequences:

>Translated_185_residues
MRVSVCVIYIPFKGCVKHVSVTIPITTEHLGPYEIDASTINPDQPIDTAFTQTLDFAGSGTVGAFPFGFGWQQSPGFFNS
TTTPSSGFFNSGAGGASGFLNDAAAAVSGLGNVFTETSGFFNAGGVGNSGFQNFGNLLSGWANLGNTVSGFYNTSMLDLA
TQALISGFGNHGARLSGILNNGSGP
>Mature_185_residues
MRVSVCVIYIPFKGCVKHVSVTIPITTEHLGPYEIDASTINPDQPIDTAFTQTLDFAGSGTVGAFPFGFGWQQSPGFFNS
TTTPSSGFFNSGAGGASGFLNDAAAAVSGLGNVFTETSGFFNAGGVGNSGFQNFGNLLSGWANLGNTVSGFYNTSMLDLA
TQALISGFGNHGARLSGILNNGSGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mycobacterial PPE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002989
- InterPro:   IPR000030 [H]

Pfam domain/function: PF01469 Pentapeptide_2; PF00823 PPE [H]

EC number: NA

Molecular weight: Translated: 18927; Mature: 18927

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVSVCVIYIPFKGCVKHVSVTIPITTEHLGPYEIDASTINPDQPIDTAFTQTLDFAGSG
CCEEEEEEEECCHHHHCEEEEEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCC
TVGAFPFGFGWQQSPGFFNSTTTPSSGFFNSGAGGASGFLNDAAAAVSGLGNVFTETSGF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
FNAGGVGNSGFQNFGNLLSGWANLGNTVSGFYNTSMLDLATQALISGFGNHGARLSGILN
EECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEEEC
NGSGP
CCCCC
>Mature Secondary Structure
MRVSVCVIYIPFKGCVKHVSVTIPITTEHLGPYEIDASTINPDQPIDTAFTQTLDFAGSG
CCEEEEEEEECCHHHHCEEEEEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCC
TVGAFPFGFGWQQSPGFFNSTTTPSSGFFNSGAGGASGFLNDAAAAVSGLGNVFTETSGF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
FNAGGVGNSGFQNFGNLLSGWANLGNTVSGFYNTSMLDLATQALISGFGNHGARLSGILN
EECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEEEC
NGSGP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230 [H]