Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
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Accession | NC_009525 |
Length | 4,419,977 |
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The map label for this gene is 148660014
Identifier: 148660014
GI number: 148660014
Start: 302196
End: 303017
Strand: Reverse
Name: 148660014
Synonym: MRA_0258
Alternate gene names: NA
Gene position: 303017-302196 (Counterclockwise)
Preceding gene: 148660015
Following gene: 148660013
Centisome position: 6.86
GC content: 58.39
Gene sequence:
>822_bases ATGAGCGCACCCACGGCGAACCGTCCTGCGATCGGCGTTTTCACACCCACCCGCGCACAAATCCCAGAACGGACGCTTCG CACCGACCTCTGGTGGTTGCCACCGCTGCTGACCAACCTCGGTCTTTTGGCGTTCATCTGCTATGCGACCACTCGGGCGT TCTGGGGCAGCCAATACTGGGTGGAAAAATATCATTACCTGACGCCGTTCTACTCGCCGTGCGTCAGCGCGTCCTGCCAG CCCGGCGCCAGTCATCTCGGCGTCTGGTTCGGGCATTTTCCAGGGTGGATTCCGTTGGGAGCGATGGTATTACCGTTCCT GCTTGGATTCCGGCTCACCTGCTATTATTACCGCAAGGCCTACTACCGGTCGGTATGGCAGTCGCCGACAAGCTGCGCAG TGCCCGAGCCGCGGGCTCATTACACCGGTGAAACCCGGCTTCCGCTGATCGTCCAGAACACCCACCGGTATTTCTTCTAT ATCGCGGTGGTGGTGTCGCTGATCAACACCTATGACGCGATCGCGGCATTTCACTCGCCGTCCGGATTCGGCTTCGGTTT GGGCAATGTCATTTTGACGATCAATGTGGTTCTGCTGTGGGCATACACCATCTCGTGCCATTCGTGCCGGCACGCCACCG GCGGTCGGCTCAAGCATTTCTCCAAGCACCCAGTGCGATACTGGATCTGGACACAGGTCAGCAAGCTCAATACCCGACAC ATGCAATTCGCGTGGATCACGCTGGGGACCCTGGCGCTCACCGATTTCTACATCATGCTGGTGGCCAGTGGCAGCATCAC AGATCTCAGATTTATTGGCTGA
Upstream 100 bases:
>100_bases GTCGGAGGTCACAGGTACTGAACAACCGAGCCCCCCAGAAAAAGGGGGCCGTTCTCTGTGTACCCTTCGACGAGATAACA CGCGAAGAGGATCACATTAG
Downstream 100 bases:
>100_bases AGGATCGTTTCAGAAGCTGAGCGAGGTTTTATGGTTGAGGTCGAGCGGCACTCCTACGACGTAGTCGTGATCGGTGCCGG CGGCGCGGGGTTACGCGCGG
Product: putative succinate dehydrogenase
Products: NA
Alternate protein names: Succinate Dehydrogenase; Succinate Dehydrogenase Membrane Anchor Subunit
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSAPTANRPAIGVFTPTRAQIPERTLRTDLWWLPPLLTNLGLLAFICYATTRAFWGSQYWVEKYHYLTPFYSPCVSASCQ PGASHLGVWFGHFPGWIPLGAMVLPFLLGFRLTCYYYRKAYYRSVWQSPTSCAVPEPRAHYTGETRLPLIVQNTHRYFFY IAVVVSLINTYDAIAAFHSPSGFGFGLGNVILTINVVLLWAYTISCHSCRHATGGRLKHFSKHPVRYWIWTQVSKLNTRH MQFAWITLGTLALTDFYIMLVASGSITDLRFIG
Sequences:
>Translated_273_residues MSAPTANRPAIGVFTPTRAQIPERTLRTDLWWLPPLLTNLGLLAFICYATTRAFWGSQYWVEKYHYLTPFYSPCVSASCQ PGASHLGVWFGHFPGWIPLGAMVLPFLLGFRLTCYYYRKAYYRSVWQSPTSCAVPEPRAHYTGETRLPLIVQNTHRYFFY IAVVVSLINTYDAIAAFHSPSGFGFGLGNVILTINVVLLWAYTISCHSCRHATGGRLKHFSKHPVRYWIWTQVSKLNTRH MQFAWITLGTLALTDFYIMLVASGSITDLRFIG >Mature_272_residues SAPTANRPAIGVFTPTRAQIPERTLRTDLWWLPPLLTNLGLLAFICYATTRAFWGSQYWVEKYHYLTPFYSPCVSASCQP GASHLGVWFGHFPGWIPLGAMVLPFLLGFRLTCYYYRKAYYRSVWQSPTSCAVPEPRAHYTGETRLPLIVQNTHRYFFYI AVVVSLINTYDAIAAFHSPSGFGFGLGNVILTINVVLLWAYTISCHSCRHATGGRLKHFSKHPVRYWIWTQVSKLNTRHM QFAWITLGTLALTDFYIMLVASGSITDLRFIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31077; Mature: 30946
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPTANRPAIGVFTPTRAQIPERTLRTDLWWLPPLLTNLGLLAFICYATTRAFWGSQYW CCCCCCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VEKYHYLTPFYSPCVSASCQPGASHLGVWFGHFPGWIPLGAMVLPFLLGFRLTCYYYRKA HHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YYRSVWQSPTSCAVPEPRAHYTGETRLPLIVQNTHRYFFYIAVVVSLINTYDAIAAFHSP HHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC SGFGFGLGNVILTINVVLLWAYTISCHSCRHATGGRLKHFSKHPVRYWIWTQVSKLNTRH CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEEHHHHHCCCCC MQFAWITLGTLALTDFYIMLVASGSITDLRFIG EEEEEHHHHHHHHHHHHHHHEECCCCCEEEECC >Mature Secondary Structure SAPTANRPAIGVFTPTRAQIPERTLRTDLWWLPPLLTNLGLLAFICYATTRAFWGSQYW CCCCCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VEKYHYLTPFYSPCVSASCQPGASHLGVWFGHFPGWIPLGAMVLPFLLGFRLTCYYYRKA HHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YYRSVWQSPTSCAVPEPRAHYTGETRLPLIVQNTHRYFFYIAVVVSLINTYDAIAAFHSP HHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC SGFGFGLGNVILTINVVLLWAYTISCHSCRHATGGRLKHFSKHPVRYWIWTQVSKLNTRH CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEEHHHHHCCCCC MQFAWITLGTLALTDFYIMLVASGSITDLRFIG EEEEEHHHHHHHHHHHHHHHEECCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA