Click here to switch to the map view.

The map label for this gene is ppe28 [H]

Identifier: 148659924

GI number: 148659924

Start: 190291

End: 191799

Strand: Reverse

Name: ppe28 [H]

Synonym: MRA_0168

Alternate gene names: 148659924

Gene position: 191799-190291 (Counterclockwise)

Preceding gene: 148659926

Following gene: 148659923

Centisome position: 4.34

GC content: 63.55

Gene sequence:

>1509_bases
ATGTCGCACCTGGTCACAGCCCCTGACATGCTGGCGACGGCAGCTGCCCATGTGGATGAGATCGCTTCCACGCTGCGGGC
CGCCAACGCGGCTGCGGCAGGCCCGACATGTAACCTGCTGGCCGCGGCCGGCGATGAGGTTTCGGCGGCAACGGCGGCCC
TGTTCAGCGCATACGGGCGGGAGTATCAGGCGGTCGTCAAGCAGGCCGCGGCGTTCCACAGCGAGTTCACCCGGACGTTG
GAGGCCGCCGGCAACGCCTACGCACACGCCGAAGCGGCCAATGCGGCCCGGGTATCGCACGCGCTGGACACTATCAACGC
ACCGATCCGGACGCTGTTGGGCCGTGCGCCGTTGAGCCCCAACGGATCCAGCGGGGCCGGCGGGCTGCCGGCGATCGCGC
AGCTGGCTGCGGAGAGTCCGATAACGGCGTTGATTATGGGCGGCACCAATAACCCGCTACCCGACCCCGAGTACGTGACA
GACATCAACAAGGCTTTCATCCAGACCCTCTTCCCGGGTGCTGTCTCGCAAGGCCTGTTCACGCCCGAGCAGTTCTGGCC
GGTTACCCCCGACCTCGGCAATCTGACGTTCAACCAGTCCGTCACCGAAGGCGTGGCGCTGCTGAATACCGCCGTCAACA
ACCAACTGGCCCTCGACAACAAGGTCGTTGCGTTCGGCTACTCGCAGAGCGCCACGATCATCAACAACTACATCAATTCG
CTGATGGCGATGGGTTCGCCGAATCCGGACGATATCTCCTTCGTCATGATTGGTAGTGGCAACAATCCCGTCGGCGGGCT
GCTGGCGCGCTTCCCCGGCTTCTACATCCCGTTCCTGGACGTGCCGTTCAATGGCGCAACCCCGGCGAATAGTCCCTACC
CGACACACATTTACACGGCCCAGTACGACGGCATCGCCCACGCGCCGCAATTCCCGCTGCGCATCCTGTCGGACATCAAC
GCCTTCATGGGCTACTTCTACGTGCACAACACGTACCCGGAACTCATGGCCACCCAGGTGGATAACGCGGTGCCGTTGCC
GACCTCCCCGGGCTATACCGGCAACACCCAGTACTACATGTTCCTGACTCAGGATCTGCCACTGCTCCAGCCGATCCGTG
ACATCCCCTACGCCGGTCCCCCGATCGCCGACCTGTTCCAGCCGCAGCTGCGGGTGCTCGTCGACTTGGGCTACGCCGAC
TACGGGCCGGGCGGCAATTACGCGGATATCCCCACTCCGGCCGGGCTGTTCTCGATCCCCAACCCGTTCGCTGTCACGTA
TTACCTGATCAAAGGGAGCCTGCAGGCGCCCTATGGCGCCATCGTGGAGATTGGGGTGGAAGCCGGATTGATTGGGCCGG
AGTGGTTCCCGGACAGCTATCCGTGGGTCCCGTCGATAAACCCGGGCCTGAATTTCTACTTCGGCCAGCCACAGGTGACA
CTGCTATCCCTGATGAGTGGCGGTCTCGGCAACATCCTGCACCTGATCCCGCCACCGGTCTTCACCTGA

Upstream 100 bases:

>100_bases
GGCAGGACCGCCTTACTCTCGTTAAGTACCTAATACCCGCGGTAGCGGGTCAGTCCCAAGTGACCGGTGCGGGCGCCGGT
CCGTTGGGAAGGACGGGGAG

Downstream 100 bases:

>100_bases
CGCGGCCGCGATAACGATTGGCCGAAAACGCCGGGCTTCCCGGCGGGCGCGCTCTAGGCTCTAAGGGCCCCAGCGTCGAA
CAGGAGACCAGATGTCCTAC

Product: PE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 501

Protein sequence:

>502_residues
MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGREYQAVVKQAAAFHSEFTRTL
EAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSPNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVT
DINKAFIQTLFPGAVSQGLFTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS
LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTAQYDGIAHAPQFPLRILSDIN
AFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD
YGPGGNYADIPTPAGLFSIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT
LLSLMSGGLGNILHLIPPPVFT

Sequences:

>Translated_502_residues
MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGREYQAVVKQAAAFHSEFTRTL
EAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSPNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVT
DINKAFIQTLFPGAVSQGLFTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS
LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTAQYDGIAHAPQFPLRILSDIN
AFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYAD
YGPGGNYADIPTPAGLFSIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT
LLSLMSGGLGNILHLIPPPVFT
>Mature_501_residues
SHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGREYQAVVKQAAAFHSEFTRTLE
AAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSPNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTD
INKAFIQTLFPGAVSQGLFTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINSL
MAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTAQYDGIAHAPQFPLRILSDINA
FMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADY
GPGGNYADIPTPAGLFSIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVTL
LSLMSGGLGNILHLIPPPVFT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mycobacterial PPE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013228
- InterPro:   IPR000030 [H]

Pfam domain/function: PF08237 PE-PPE; PF00823 PPE [H]

EC number: NA

Molecular weight: Translated: 53056; Mature: 52924

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCH
EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF
CCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCC
TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS
CHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCEEECCEEEEEECCCCHHHHHHHHHH
LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA
HHHCCCCCCCCEEEEEEECCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEE
QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM
ECCCCCCCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCCCCCCCCCCCCCCCEEEE
FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIP
EEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCC
NPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT
CCCEEEEEEEECCCCCCCCCEEEECHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHH
LLSLMSGGLGNILHLIPPPVFT
HHHHHCCCHHCCHHHCCCCCCC
>Mature Secondary Structure 
SHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGR
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCH
EYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLF
CCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCC
TPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLALDNKVVAFGYSQSATIINNYINS
CHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCEEECCEEEEEECCCCHHHHHHHHHH
LMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTA
HHHCCCCCCCCEEEEEEECCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEE
QYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYM
ECCCCCCCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCCCCCCCCCCCCCCCEEEE
FLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIP
EEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCC
NPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVT
CCCEEEEEEEECCCCCCCCCEEEECHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHH
LLSLMSGGLGNILHLIPPPVFT
HHHHHCCCHHCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]