Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
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Accession | NC_009525 |
Length | 4,419,977 |
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The map label for this gene is 148659899
Identifier: 148659899
GI number: 148659899
Start: 164003
End: 164608
Strand: Reverse
Name: 148659899
Synonym: MRA_0142
Alternate gene names: NA
Gene position: 164608-164003 (Counterclockwise)
Preceding gene: 148659901
Following gene: 148659896
Centisome position: 3.72
GC content: 65.02
Gene sequence:
>606_bases GTGACAGCAGTCGCCGCCGGCGCGTTGGTCGTCGAGACCGACTCGTTTCGGCTACGGTTGCTCGACGGCCTGGTCGCCTC GATCGGTGAGCGGGGTTATCGCGCCACCACCGTCTCCGACATCGTCCGGCACGCCCGCACATCCAAGCGCACGTTCTACG ACCGGTTCACCAGCAAGGAACAGTGCTTTTTGGAACTCCTGCTAGCGGACAACGAGACGTTGGGCAACAGCATCCGGGCG GCCGTCGATCCAAACGCCGACTGGCACGACCAGATTCGTCAGGCGGTCGAGGCCTACGTCACCCATATCGAATCCAGGCC GGCGGTGACGTTGAGTTGGATCCGTGAATTCCCGTCGCTCGGTGCCGCCGCTTACCCCGTCCAGCGCCGCGGCATGGAGC AGCTAACCAGCCTGCTGATCGAGCTCAGCGCCAGCCCTGGGTTCCGGCGGGCTAACCTACCGCCACTGAATGTGCCACTG GCCGTAATCTTGCTGGGCGGTTTGCGTGAACTGACCGCGCTGACCGTCGAGGACGGCCAGCCGATCCGGAACATCGTCGA GCCGGCGGTGGATGCGTCAATCGCGCTGCTCGGTCCCCGCAGCTAG
Upstream 100 bases:
>100_bases ACGTCCCTGGATCGGGCGTGGTACGGTGGTGTACCGTGGCTTGTCCAGTACGGTACTCTTTGGTACCAAACCTGACAAGG GATAGGTAGAGGAGGCGCGG
Downstream 100 bases:
>100_bases GAACGCACGCACCCGGTCGAGCACCAGCTCGGGTCGCTGCTCGACGATCCAATGGCCCACGCCGTCGACCAGCTCCACCT CGAAATCGCTGGCCCGCTCG
Product: putative transcriptional regulatory protein
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulatory Protein; Transcriptional Regulator; Regulatory Protein TetR
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MTAVAAGALVVETDSFRLRLLDGLVASIGERGYRATTVSDIVRHARTSKRTFYDRFTSKEQCFLELLLADNETLGNSIRA AVDPNADWHDQIRQAVEAYVTHIESRPAVTLSWIREFPSLGAAAYPVQRRGMEQLTSLLIELSASPGFRRANLPPLNVPL AVILLGGLRELTALTVEDGQPIRNIVEPAVDASIALLGPRS
Sequences:
>Translated_201_residues MTAVAAGALVVETDSFRLRLLDGLVASIGERGYRATTVSDIVRHARTSKRTFYDRFTSKEQCFLELLLADNETLGNSIRA AVDPNADWHDQIRQAVEAYVTHIESRPAVTLSWIREFPSLGAAAYPVQRRGMEQLTSLLIELSASPGFRRANLPPLNVPL AVILLGGLRELTALTVEDGQPIRNIVEPAVDASIALLGPRS >Mature_200_residues TAVAAGALVVETDSFRLRLLDGLVASIGERGYRATTVSDIVRHARTSKRTFYDRFTSKEQCFLELLLADNETLGNSIRAA VDPNADWHDQIRQAVEAYVTHIESRPAVTLSWIREFPSLGAAAYPVQRRGMEQLTSLLIELSASPGFRRANLPPLNVPLA VILLGGLRELTALTVEDGQPIRNIVEPAVDASIALLGPRS
Specific function: Unknown
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21975; Mature: 21844
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVAAGALVVETDSFRLRLLDGLVASIGERGYRATTVSDIVRHARTSKRTFYDRFTSKE CCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH QCFLELLLADNETLGNSIRAAVDPNADWHDQIRQAVEAYVTHIESRPAVTLSWIREFPSL HHHHHHHHHCCCHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC GAAAYPVQRRGMEQLTSLLIELSASPGFRRANLPPLNVPLAVILLGGLRELTALTVEDGQ CCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHEEEECCCC PIRNIVEPAVDASIALLGPRS HHHHHHHHHHCCEEEECCCCC >Mature Secondary Structure TAVAAGALVVETDSFRLRLLDGLVASIGERGYRATTVSDIVRHARTSKRTFYDRFTSKE CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH QCFLELLLADNETLGNSIRAAVDPNADWHDQIRQAVEAYVTHIESRPAVTLSWIREFPSL HHHHHHHHHCCCHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC GAAAYPVQRRGMEQLTSLLIELSASPGFRRANLPPLNVPLAVILLGGLRELTALTVEDGQ CCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHEEEECCCC PIRNIVEPAVDASIALLGPRS HHHHHHHHHHCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA