Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
---|---|
Accession | NC_009525 |
Length | 4,419,977 |
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The map label for this gene is fusA2 [C]
Identifier: 148659884
GI number: 148659884
Start: 146986
End: 149130
Strand: Reverse
Name: fusA2 [C]
Synonym: MRA_0127
Alternate gene names: 148659884
Gene position: 149130-146986 (Counterclockwise)
Preceding gene: 148659885
Following gene: 148659882
Centisome position: 3.37
GC content: 65.92
Gene sequence:
>2145_bases ATGGCCGACAGAGTGAATGCTTCCCAGGGCGCGGCCGCCGCTCCCACCGCAAACGGGCCCGGCGGCGTTCGCAACGTGGT TCTGGTGGGGCCCTCGGGGGGCGGCAAGACCACCCTCATCGAGGCTCTCCTGGTGGCGGCCAAGGTGTTGTCCAGGCCGG GCTCGGTCACCGAGGGCACCACGGTCTGCGACTTCGACGAGGCGGAGATCCGGCAACAGCGCTCGGTGGGCCTTGCGGTC GCCTCGCTGGCTTACGACGGCATCAAGGTCAACCTCGTCGACACCCCTGGGTACGCCGACTTCGTGGGTGAGCTGCGGGC CGGGTTGCGGGCCGCCGATTGCGCACTGTTCGTGATCGCGGCCAACGAGGGCGTCGACGAACCGACCAAGTCCCTGTGGC AGGAATGCAGCCAGGTCGGCATGCCCCGCGCGGTGGTCATCACCAAGCTGGACCACGCCCGGGCGAACTACCGGGAAGCG CTGACCGCGGCACAAGACGCCTTCGGCGACAAGGTCTTACCGCTCTACCTGCCGTCCGGTGACGGCCTGATCGGATTGCT TTCGCAGGCACTGTACGAGTACGCCGACGGCAAGCGAACGACACGAACCCCGGCCGAGTCGGACACCGAGCGAATCGAGG AGGCGCGCGGCGCCTTGATCGAAGGAATCATCGAGGAATCCGAGGATGAGTCCTTGATGGAGCGCTACCTCGGCGGCGAG ACGATCGACGAGTCGGTGCTGATCCAGGATCTGGAGAAAGCCGTCGCCCGAGGCTCGTTCTTCCCGGTGATTCCGGTGTG CAGCAGCACCGGGGTCGGCACACTGGAATTGCTTGAGGTAGCCACCCGCGGATTTCCGTCTCCGATGGAGCACCCACTGC CGGAGGTCTTTACCCCGCAGGGTGTCCCGCATGCGGAGCTGGCCTGTGACAATGACGCGCCGTTGCTCGCCGAGGTGGTG AAGACGACGTCGGACCCCTACGTCGGCCGGGTCAGCTTGGTGCGGGTGTTCTCCGGAACCATCAGGCCCGACACGACGGT CCATGTGTCGGGCCATTTCTCATCGTTTTTCGGCGGCGGAACTAGTAACACGCACCCCGACCACGACGAAGACGAGCGCA TCGGAGTCTTGTCGTTCCCGCTGGGCAAGCAACAGCGCCCGGCAGCAGCCGTGGTCGCGGGCGACATCTGCGCCATCGGC AAGCTGAGCCGGGCCGAGACCGGGGACACACTCTCGGATAAGGCCGAGCCCCTGGTGCTGAAACCCTGGACCATGCCCGA GCCGCTGCTGCCGATCGCCATTGCGGCGCATGCCAAGACCGACGAAGACAAGCTGTCGGTCGGGTTGGGCCGGTTGGCCG CCGAAGACCCGACACTGCGGATCGAGCAAAATCAAGAGACCCATCAGGTCGTGCTGTGGTGTATGGGCGAGGCCCATGCC GGCGTCGTCCTGGATACACTGGCCAACCGGTACGGCGTCAGCGTAGACACGATCGAGCTGCGGGTGCCGCTGCGGGAAAC CTTCGCCGGCAATGCGAAAGGCCATGGCCGCCACATCAAACAGTCCGGTGGTCACGGTCAGTACGGGGTGTGCGACATCG AGGTGGAGCCGCTGCCGGAGGGCTCCGGGTTCGAGTTCCTCGACAAAGTGGTTGGCGGGGCGGTGCCGCGGCAGTTTATC CCCAATGTGGAGAAAGGTGTCCGCGCACAGATGGATAAGGGAGTGCACGCCGGCTACCCGGTGGTCGATATCCGGGTCAC GTTGCTCGACGGCAAAGCCCACAGCGTCGACTCTTCCGATTTCGCCTTCCAAATGGCCGGCGCGCTCGCATTGCGGGAGG CCGCGGCCGCGACGAAGGTGATCTTGCTCGAGCCAATCGATGAGATTTCGGTGCTGGTACCCGACGATTTCGTCGGCGCG GTGTTGGGCGACCTGTCCAGTCGTCGTGGCCGAGTGCTCGGCACCGAGACCGCGGGGCACGACCGCACGGTGATCAAGGC CGAGGTGCCTCAGGTCGAGCTGACCCGCTACGCAATCGATTTGCGCTCGCTGGCGCATGGGGCCGCATCCTTCACCCGTT CGTTTGCCCGCTACGAACCGATGCCGGAATCCGCCGCCGCCCGGGTAAAGGCCGGGGCCGGCTAG
Upstream 100 bases:
>100_bases ACCCGACCCTTGTGCTGGGCGGCAGTTGGGAGAAAAGTTGCCTACTACGTCCTGCTGGGCCACACCACGGGAACCGACCC CGGAGAACTGGAGGAAAGCC
Downstream 100 bases:
>100_bases CTACACCGAATGGCCGAACCGTTCGGCGACAGCGCGGCGGTCGAGCGAACCCTTCGCGGTGTGCGGCAGCCCGCTGGCCT CCTGGAAGGAGGCCGGGATC
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: NA
Number of amino acids: Translated: 714; Mature: 713
Protein sequence:
>714_residues MADRVNASQGAAAAPTANGPGGVRNVVLVGPSGGGKTTLIEALLVAAKVLSRPGSVTEGTTVCDFDEAEIRQQRSVGLAV ASLAYDGIKVNLVDTPGYADFVGELRAGLRAADCALFVIAANEGVDEPTKSLWQECSQVGMPRAVVITKLDHARANYREA LTAAQDAFGDKVLPLYLPSGDGLIGLLSQALYEYADGKRTTRTPAESDTERIEEARGALIEGIIEESEDESLMERYLGGE TIDESVLIQDLEKAVARGSFFPVIPVCSSTGVGTLELLEVATRGFPSPMEHPLPEVFTPQGVPHAELACDNDAPLLAEVV KTTSDPYVGRVSLVRVFSGTIRPDTTVHVSGHFSSFFGGGTSNTHPDHDEDERIGVLSFPLGKQQRPAAAVVAGDICAIG KLSRAETGDTLSDKAEPLVLKPWTMPEPLLPIAIAAHAKTDEDKLSVGLGRLAAEDPTLRIEQNQETHQVVLWCMGEAHA GVVLDTLANRYGVSVDTIELRVPLRETFAGNAKGHGRHIKQSGGHGQYGVCDIEVEPLPEGSGFEFLDKVVGGAVPRQFI PNVEKGVRAQMDKGVHAGYPVVDIRVTLLDGKAHSVDSSDFAFQMAGALALREAAAATKVILLEPIDEISVLVPDDFVGA VLGDLSSRRGRVLGTETAGHDRTVIKAEVPQVELTRYAIDLRSLAHGAASFTRSFARYEPMPESAAARVKAGAG
Sequences:
>Translated_714_residues MADRVNASQGAAAAPTANGPGGVRNVVLVGPSGGGKTTLIEALLVAAKVLSRPGSVTEGTTVCDFDEAEIRQQRSVGLAV ASLAYDGIKVNLVDTPGYADFVGELRAGLRAADCALFVIAANEGVDEPTKSLWQECSQVGMPRAVVITKLDHARANYREA LTAAQDAFGDKVLPLYLPSGDGLIGLLSQALYEYADGKRTTRTPAESDTERIEEARGALIEGIIEESEDESLMERYLGGE TIDESVLIQDLEKAVARGSFFPVIPVCSSTGVGTLELLEVATRGFPSPMEHPLPEVFTPQGVPHAELACDNDAPLLAEVV KTTSDPYVGRVSLVRVFSGTIRPDTTVHVSGHFSSFFGGGTSNTHPDHDEDERIGVLSFPLGKQQRPAAAVVAGDICAIG KLSRAETGDTLSDKAEPLVLKPWTMPEPLLPIAIAAHAKTDEDKLSVGLGRLAAEDPTLRIEQNQETHQVVLWCMGEAHA GVVLDTLANRYGVSVDTIELRVPLRETFAGNAKGHGRHIKQSGGHGQYGVCDIEVEPLPEGSGFEFLDKVVGGAVPRQFI PNVEKGVRAQMDKGVHAGYPVVDIRVTLLDGKAHSVDSSDFAFQMAGALALREAAAATKVILLEPIDEISVLVPDDFVGA VLGDLSSRRGRVLGTETAGHDRTVIKAEVPQVELTRYAIDLRSLAHGAASFTRSFARYEPMPESAAARVKAGAG >Mature_713_residues ADRVNASQGAAAAPTANGPGGVRNVVLVGPSGGGKTTLIEALLVAAKVLSRPGSVTEGTTVCDFDEAEIRQQRSVGLAVA SLAYDGIKVNLVDTPGYADFVGELRAGLRAADCALFVIAANEGVDEPTKSLWQECSQVGMPRAVVITKLDHARANYREAL TAAQDAFGDKVLPLYLPSGDGLIGLLSQALYEYADGKRTTRTPAESDTERIEEARGALIEGIIEESEDESLMERYLGGET IDESVLIQDLEKAVARGSFFPVIPVCSSTGVGTLELLEVATRGFPSPMEHPLPEVFTPQGVPHAELACDNDAPLLAEVVK TTSDPYVGRVSLVRVFSGTIRPDTTVHVSGHFSSFFGGGTSNTHPDHDEDERIGVLSFPLGKQQRPAAAVVAGDICAIGK LSRAETGDTLSDKAEPLVLKPWTMPEPLLPIAIAAHAKTDEDKLSVGLGRLAAEDPTLRIEQNQETHQVVLWCMGEAHAG VVLDTLANRYGVSVDTIELRVPLRETFAGNAKGHGRHIKQSGGHGQYGVCDIEVEPLPEGSGFEFLDKVVGGAVPRQFIP NVEKGVRAQMDKGVHAGYPVVDIRVTLLDGKAHSVDSSDFAFQMAGALALREAAAATKVILLEPIDEISVLVPDDFVGAV LGDLSSRRGRVLGTETAGHDRTVIKAEVPQVELTRYAIDLRSLAHGAASFTRSFARYEPMPESAAARVKAGAG
Specific function: This Protein Promotes The GTP-Dependent Translocation Of The Nascent Protein Chain From The A-Site To The P-Site Of The Ribosome. [C]
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily
Homologues:
Organism=Homo sapiens, GI18390331, Length=704, Percent_Identity=28.6931818181818, Blast_Score=260, Evalue=3e-69, Organism=Homo sapiens, GI19923640, Length=732, Percent_Identity=26.0928961748634, Blast_Score=192, Evalue=1e-48, Organism=Homo sapiens, GI25306287, Length=359, Percent_Identity=25.3481894150418, Blast_Score=111, Evalue=3e-24, Organism=Homo sapiens, GI25306283, Length=414, Percent_Identity=27.2946859903382, Blast_Score=108, Evalue=1e-23, Organism=Escherichia coli, GI1789738, Length=710, Percent_Identity=32.3943661971831, Blast_Score=353, Evalue=3e-98, Organism=Escherichia coli, GI1790835, Length=330, Percent_Identity=24.5454545454545, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17533571, Length=714, Percent_Identity=26.750700280112, Blast_Score=239, Evalue=5e-63, Organism=Caenorhabditis elegans, GI17556745, Length=156, Percent_Identity=31.4102564102564, Blast_Score=92, Evalue=9e-19, Organism=Caenorhabditis elegans, GI71988819, Length=152, Percent_Identity=31.5789473684211, Blast_Score=67, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71988811, Length=152, Percent_Identity=31.5789473684211, Blast_Score=66, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6323098, Length=698, Percent_Identity=25.5014326647564, Blast_Score=210, Evalue=7e-55, Organism=Saccharomyces cerevisiae, GI6322359, Length=826, Percent_Identity=23.728813559322, Blast_Score=177, Evalue=4e-45, Organism=Drosophila melanogaster, GI24582462, Length=697, Percent_Identity=29.2682926829268, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI221458488, Length=748, Percent_Identity=22.8609625668449, Blast_Score=160, Evalue=3e-39,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): EFGL_MYCTU (O07170)
Other databases:
- EMBL: BX842572 - EMBL: AE000516 - PIR: A70983 - RefSeq: NP_214634.1 - RefSeq: NP_334538.1 - ProteinModelPortal: O07170 - SMR: O07170 - EnsemblBacteria: EBMYCT00000001508 - EnsemblBacteria: EBMYCT00000070236 - GeneID: 886894 - GeneID: 922988 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0128 - KEGG: mtu:Rv0120c - TIGR: MT0128 - TubercuList: Rv0120c - GeneTree: EBGT00050000015348 - HOGENOM: HBG737692 - OMA: AFIFKTM - ProtClustDB: PRK12740 - InterPro: IPR003593 - InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 - Gene3D: G3DSA:3.30.230.10 - Gene3D: G3DSA:3.30.70.240 - SMART: SM00382 - SMART: SM00838 - SMART: SM00889 - TIGRFAMs: TIGR00231
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2; SSF54980 EFG_III_V; SSF54211 Ribosomal_S5_D2-typ_fold; SSF50447 Translat_factor
EC number: 3.6.5.3
Molecular weight: Translated: 75631; Mature: 75500
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADRVNASQGAAAAPTANGPGGVRNVVLVGPSGGGKTTLIEALLVAAKVLSRPGSVTEGT CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC TVCDFDEAEIRQQRSVGLAVASLAYDGIKVNLVDTPGYADFVGELRAGLRAADCALFVIA EEECCCHHHHHHHHHHHHHHHHEEECCEEEEEEECCCHHHHHHHHHHCCEECCEEEEEEE ANEGVDEPTKSLWQECSQVGMPRAVVITKLDHARANYREALTAAQDAFGDKVLPLYLPSG CCCCCCHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCC DGLIGLLSQALYEYADGKRTTRTPAESDTERIEEARGALIEGIIEESEDESLMERYLGGE CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC TIDESVLIQDLEKAVARGSFFPVIPVCSSTGVGTLELLEVATRGFPSPMEHPLPEVFTPQ CCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC GVPHAELACDNDAPLLAEVVKTTSDPYVGRVSLVRVFSGTIRPDTTVHVSGHFSSFFGGG CCCCCCEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCHHHHCCCC TSNTHPDHDEDERIGVLSFPLGKQQRPAAAVVAGDICAIGKLSRAETGDTLSDKAEPLVL CCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCHHHHCCCCCCCCCCCCCCCCCCEEE KPWTMPEPLLPIAIAAHAKTDEDKLSVGLGRLAAEDPTLRIEQNQETHQVVLWCMGEAHA CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCCCC GVVLDTLANRYGVSVDTIELRVPLRETFAGNAKGHGRHIKQSGGHGQYGVCDIEVEPLPE CHHHHHHHHHHCCEEEEEEEEECHHHHHCCCCCCCCCHHHCCCCCCCCEEEEEEEECCCC GSGFEFLDKVVGGAVPRQFIPNVEKGVRAQMDKGVHAGYPVVDIRVTLLDGKAHSVDSSD CCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCH FAFQMAGALALREAAAATKVILLEPIDEISVLVPDDFVGAVLGDLSSRRGRVLGTETAGH HHHHHHHHHHHHHHHHHEEEEEECCCCCCEEECCCHHHHHHHHHHHHCCCCEEECCCCCC DRTVIKAEVPQVELTRYAIDLRSLAHGAASFTRSFARYEPMPESAAARVKAGAG CCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCC >Mature Secondary Structure ADRVNASQGAAAAPTANGPGGVRNVVLVGPSGGGKTTLIEALLVAAKVLSRPGSVTEGT CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC TVCDFDEAEIRQQRSVGLAVASLAYDGIKVNLVDTPGYADFVGELRAGLRAADCALFVIA EEECCCHHHHHHHHHHHHHHHHEEECCEEEEEEECCCHHHHHHHHHHCCEECCEEEEEEE ANEGVDEPTKSLWQECSQVGMPRAVVITKLDHARANYREALTAAQDAFGDKVLPLYLPSG CCCCCCHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCC DGLIGLLSQALYEYADGKRTTRTPAESDTERIEEARGALIEGIIEESEDESLMERYLGGE CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC TIDESVLIQDLEKAVARGSFFPVIPVCSSTGVGTLELLEVATRGFPSPMEHPLPEVFTPQ CCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC GVPHAELACDNDAPLLAEVVKTTSDPYVGRVSLVRVFSGTIRPDTTVHVSGHFSSFFGGG CCCCCCEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCHHHHCCCC TSNTHPDHDEDERIGVLSFPLGKQQRPAAAVVAGDICAIGKLSRAETGDTLSDKAEPLVL CCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCHHHHCCCCCCCCCCCCCCCCCCEEE KPWTMPEPLLPIAIAAHAKTDEDKLSVGLGRLAAEDPTLRIEQNQETHQVVLWCMGEAHA CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCCCC GVVLDTLANRYGVSVDTIELRVPLRETFAGNAKGHGRHIKQSGGHGQYGVCDIEVEPLPE CHHHHHHHHHHCCEEEEEEEEECHHHHHCCCCCCCCCHHHCCCCCCCCEEEEEEEECCCC GSGFEFLDKVVGGAVPRQFIPNVEKGVRAQMDKGVHAGYPVVDIRVTLLDGKAHSVDSSD CCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCH FAFQMAGALALREAAAATKVILLEPIDEISVLVPDDFVGAVLGDLSSRRGRVLGTETAGH HHHHHHHHHHHHHHHHHEEEEEECCCCCCEEECCCHHHHHHHHHHHHCCCCEEECCCCCC DRTVIKAEVPQVELTRYAIDLRSLAHGAASFTRSFARYEPMPESAAARVKAGAG CCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036