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The map label for this gene is hycP

Identifier: 148659847

GI number: 148659847

Start: 94647

End: 95309

Strand: Direct

Name: hycP

Synonym: MRA_0089

Alternate gene names: NA

Gene position: 94647-95309 (Clockwise)

Preceding gene: 148659846

Following gene: 148659848

Centisome position: 2.14

GC content: 68.93

Gene sequence:

>663_bases
ATGAGTAACGCCAACTTCTCGATCCTGGTCGACTTCGCCGCGGGTGGGCTGGTGTTGGCGTCGGTGCTGATTGTCTGGCG
CCGCGACCTGCGGGCCATTGTGCGGCTGCTGGCCTGGCAGGGTGCTGCGCTGGCCGCGATCCCGCTACTGCGCGGCATCC
GCGACAACGACCGTGCGCTGATCGCGGTGGGCATCGCCGTGTTGGCGCTGCGCGCGCTGGTGTTGCCCTGGCTGCTGGCC
CGCGCGGTGGGCGCCGAAGCGGCCGCGCAGCGGGAGGCCACCCCGTTGGTCAACACCGCCAGCTCGCTGCTGATTACCGC
CGGACTGACCCTCACCGCGTTCGCGATCACCCAGCCGGTGGTCAACCTGGAACCGGGCGTCACCATCAACGCGGTGCCGG
CCGCGTTCGCGGTGGTGCTGATCGCGCTGTTCGTGATGACCACGCGGCTGCACGCGGTCTCGCAGGCCGCCGGATTCCTG
ATGCTAGACAACGGGATCGCGGCGACCGCATTCCTGCTCACCGCCGGGGTGCCGCTGATCGTCGAACTTGGTGCCTCGCT
GGACGTGCTGTTCGCGGTCATCGTGATCGGCGTGTTGACCGGCCGGCTGCGCCGCATTTTCGGCGATGCCGACCTGGACA
AGCTGCGGGAGTTGCGGGATTGA

Upstream 100 bases:

>100_bases
TTGTTCCGGGTACCCGAACTGCTGGCCGGCTCGTTTCTGCTGGCCTTGCTCGCGGTCACCGCCGCCAACTTCTTCACGGT
GGGGGCGTGAGGGGCCAGCG

Downstream 100 bases:

>100_bases
TGACCGGTTTGCTGCTTGCCGCGATCCTCGCACCGCTCGCCGCGTCAATCGCCTCCTTGATCACCGGGTGGCGACGCACG
ACGGCGACGCTCACCGCGCT

Product: putative hydrogenase HycP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSNANFSILVDFAAGGLVLASVLIVWRRDLRAIVRLLAWQGAALAAIPLLRGIRDNDRALIAVGIAVLALRALVLPWLLA
RAVGAEAAAQREATPLVNTASSLLITAGLTLTAFAITQPVVNLEPGVTINAVPAAFAVVLIALFVMTTRLHAVSQAAGFL
MLDNGIAATAFLLTAGVPLIVELGASLDVLFAVIVIGVLTGRLRRIFGDADLDKLRELRD

Sequences:

>Translated_220_residues
MSNANFSILVDFAAGGLVLASVLIVWRRDLRAIVRLLAWQGAALAAIPLLRGIRDNDRALIAVGIAVLALRALVLPWLLA
RAVGAEAAAQREATPLVNTASSLLITAGLTLTAFAITQPVVNLEPGVTINAVPAAFAVVLIALFVMTTRLHAVSQAAGFL
MLDNGIAATAFLLTAGVPLIVELGASLDVLFAVIVIGVLTGRLRRIFGDADLDKLRELRD
>Mature_219_residues
SNANFSILVDFAAGGLVLASVLIVWRRDLRAIVRLLAWQGAALAAIPLLRGIRDNDRALIAVGIAVLALRALVLPWLLAR
AVGAEAAAQREATPLVNTASSLLITAGLTLTAFAITQPVVNLEPGVTINAVPAAFAVVLIALFVMTTRLHAVSQAAGFLM
LDNGIAATAFLLTAGVPLIVELGASLDVLFAVIVIGVLTGRLRRIFGDADLDKLRELRD

Specific function: Unknown

COG id: COG4237

COG function: function code C; Hydrogenase 4 membrane component (E)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y085_MYCTU (P64681)

Other databases:

- EMBL:   BX842572
- EMBL:   AE000516
- PIR:   E70749
- RefSeq:   NP_214599.1
- RefSeq:   NP_334503.1
- ProteinModelPortal:   P64681
- EnsemblBacteria:   EBMYCT00000000379
- EnsemblBacteria:   EBMYCT00000070700
- GeneID:   886973
- GeneID:   922882
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT0092
- KEGG:   mtu:Rv0085
- TIGR:   MT0092
- TubercuList:   Rv0085
- GeneTree:   EBGT00050000018003
- HOGENOM:   HBG569118
- OMA:   QVIGYLM
- ProtClustDB:   CLSK790250
- GO:   GO:0040007

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23043; Mature: 22912

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1b382cc4)-; HASH(0x1b817ea0)-; HASH(0x1b4e370c)-; HASH(0x1b2830e4)-; HASH(0x1af8550c)-; HASH(0x1b293700)-; HASH(0x175ea580)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNANFSILVDFAAGGLVLASVLIVWRRDLRAIVRLLAWQGAALAAIPLLRGIRDNDRAL
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHH
IAVGIAVLALRALVLPWLLARAVGAEAAAQREATPLVNTASSLLITAGLTLTAFAITQPV
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
VNLEPGVTINAVPAAFAVVLIALFVMTTRLHAVSQAAGFLMLDNGIAATAFLLTAGVPLI
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCCHHH
VELGASLDVLFAVIVIGVLTGRLRRIFGDADLDKLRELRD
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCH
>Mature Secondary Structure 
SNANFSILVDFAAGGLVLASVLIVWRRDLRAIVRLLAWQGAALAAIPLLRGIRDNDRAL
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHH
IAVGIAVLALRALVLPWLLARAVGAEAAAQREATPLVNTASSLLITAGLTLTAFAITQPV
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
VNLEPGVTINAVPAAFAVVLIALFVMTTRLHAVSQAAGFLMLDNGIAATAFLLTAGVPLI
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCCHHH
VELGASLDVLFAVIVIGVLTGRLRRIFGDADLDKLRELRD
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036