Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is 148653539
Identifier: 148653539
GI number: 148653539
Start: 2156283
End: 2156765
Strand: Direct
Name: 148653539
Synonym: PsycPRwf_1742
Alternate gene names: NA
Gene position: 2156283-2156765 (Clockwise)
Preceding gene: 148653538
Following gene: 148653541
Centisome position: 72.38
GC content: 41.61
Gene sequence:
>483_bases ATGGGTAATAGTACTGTGAGCCATAACCTTGTGCTTCAAAGTAACACCTTGCAAGCGGTAGATAAGATGTCTGCTCAAGA AGATGTCACCTCACCTTTAAAAACATCAGCTCTAGAAGCAGTGCCTTGCGTTACTATCAAACCCTCCAAACTGTATGCCA AGACGCCTGATACAGACTTGCTGGCCATTCAAACTTTATACTCTAGTAACCAATCAGCTTCTAATGATTTAACACCTCAA CAGCCCTCCTCTACGTTAGCTGCTTTTTCTAGTAAAGATGTTCAGGTTGGCTCAATCTCTAACCCTGATGCGCCTTTATC AGCCCCTACTCATGCCCATGGTATTTTTGCCACTCAGCCTAATCTTCATCAACACATTAAGCTAATCTTTGGTGCCAAAG TTGCTGACTCTATTAACATCATGTCAGTAAGCTTTTTACTCTCAGGCATGCTACTTATGTTTTATTTAGTGCATTTAGCC TAG
Upstream 100 bases:
>100_bases TTGTGTGCCTATGAAAGTCTCTACGCCAAACAAAACCTTTACTACGGCGCCCGCAACCCTACCTTTTTCTGCTTATTCAG CTAAGGCGGAGCATAGTATT
Downstream 100 bases:
>100_bases TTATTGCTTAATTGAGCCGTTTCAACAGCTGCACTGATTGTTGAGATTTTTATGACACAGTGGCTCATTAAAAATCCTGA CAAAAAAAGAGCTTAGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MGNSTVSHNLVLQSNTLQAVDKMSAQEDVTSPLKTSALEAVPCVTIKPSKLYAKTPDTDLLAIQTLYSSNQSASNDLTPQ QPSSTLAAFSSKDVQVGSISNPDAPLSAPTHAHGIFATQPNLHQHIKLIFGAKVADSINIMSVSFLLSGMLLMFYLVHLA
Sequences:
>Translated_160_residues MGNSTVSHNLVLQSNTLQAVDKMSAQEDVTSPLKTSALEAVPCVTIKPSKLYAKTPDTDLLAIQTLYSSNQSASNDLTPQ QPSSTLAAFSSKDVQVGSISNPDAPLSAPTHAHGIFATQPNLHQHIKLIFGAKVADSINIMSVSFLLSGMLLMFYLVHLA >Mature_159_residues GNSTVSHNLVLQSNTLQAVDKMSAQEDVTSPLKTSALEAVPCVTIKPSKLYAKTPDTDLLAIQTLYSSNQSASNDLTPQQ PSSTLAAFSSKDVQVGSISNPDAPLSAPTHAHGIFATQPNLHQHIKLIFGAKVADSINIMSVSFLLSGMLLMFYLVHLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17006; Mature: 16874
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNSTVSHNLVLQSNTLQAVDKMSAQEDVTSPLKTSALEAVPCVTIKPSKLYAKTPDTDL CCCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEECCCEEEECCCCCHH LAIQTLYSSNQSASNDLTPQQPSSTLAAFSSKDVQVGSISNPDAPLSAPTHAHGIFATQP HHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEECCC NLHQHIKLIFGAKVADSINIMSVSFLLSGMLLMFYLVHLA CHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GNSTVSHNLVLQSNTLQAVDKMSAQEDVTSPLKTSALEAVPCVTIKPSKLYAKTPDTDL CCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEECCCEEEECCCCCHH LAIQTLYSSNQSASNDLTPQQPSSTLAAFSSKDVQVGSISNPDAPLSAPTHAHGIFATQP HHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEECCC NLHQHIKLIFGAKVADSINIMSVSFLLSGMLLMFYLVHLA CHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA