Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is 148652651
Identifier: 148652651
GI number: 148652651
Start: 997922
End: 998344
Strand: Direct
Name: 148652651
Synonym: PsycPRwf_0842
Alternate gene names: NA
Gene position: 997922-998344 (Clockwise)
Preceding gene: 148652650
Following gene: 148652652
Centisome position: 33.5
GC content: 41.84
Gene sequence:
>423_bases ATGATTAATACAAAAATATATCGCGCAATTTATAATTTAGCTGAAGACTTATTAGAGGCCGATAGCAAAAACGATCAAGC CCGCTTTGATAAGCTGTATGCTGAGCTTAAAGCCATTTGTGACGACAATGAAAATAGCGATAAAGACCATCCGGAGCAGT GGGAAACGTTGGCGGACTTTACCGCCGATCTGGATCAGGCATTGGTCATCTATGACAAAGCCTTGGCCAAAGCCACTGCC ATTAATTCCAAAGATCATATGTCCTCCATCGCTTTTTCGATGGCAGAGCTGCAGTTAGAATTGGGTCAGACTGAGGCGGC CATTAAGAGTCTAAAGCAGGCCAAAATTACGGCCAATAAAATTGAAGACAAAGAATTTAAGCAAGAGATTGATACGCTGC TGACCAAGTTGTTAACTCATTAA
Upstream 100 bases:
>100_bases TATAATCAATAACACACTCATTTTTAGCAAGTTTTTAGCCAATGGCTTGCCGCTGCAAGGGCGGCTATTGAGCGTTATTC ATCCCCACTAAGGCCCATTT
Downstream 100 bases:
>100_bases TTTGTTAGATCGATAAGGATGTACCTTGGACTGCTTAAACTTCCCCGCTATTGCTAATATCGATAATCCTCAATTGGCAG CTGATCTACAGCAGCTTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MINTKIYRAIYNLAEDLLEADSKNDQARFDKLYAELKAICDDNENSDKDHPEQWETLADFTADLDQALVIYDKALAKATA INSKDHMSSIAFSMAELQLELGQTEAAIKSLKQAKITANKIEDKEFKQEIDTLLTKLLTH
Sequences:
>Translated_140_residues MINTKIYRAIYNLAEDLLEADSKNDQARFDKLYAELKAICDDNENSDKDHPEQWETLADFTADLDQALVIYDKALAKATA INSKDHMSSIAFSMAELQLELGQTEAAIKSLKQAKITANKIEDKEFKQEIDTLLTKLLTH >Mature_140_residues MINTKIYRAIYNLAEDLLEADSKNDQARFDKLYAELKAICDDNENSDKDHPEQWETLADFTADLDQALVIYDKALAKATA INSKDHMSSIAFSMAELQLELGQTEAAIKSLKQAKITANKIEDKEFKQEIDTLLTKLLTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15852; Mature: 15852
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINTKIYRAIYNLAEDLLEADSKNDQARFDKLYAELKAICDDNENSDKDHPEQWETLADF CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH TADLDQALVIYDKALAKATAINSKDHMSSIAFSMAELQLELGQTEAAIKSLKQAKITANK HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH IEDKEFKQEIDTLLTKLLTH HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MINTKIYRAIYNLAEDLLEADSKNDQARFDKLYAELKAICDDNENSDKDHPEQWETLADF CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH TADLDQALVIYDKALAKATAINSKDHMSSIAFSMAELQLELGQTEAAIKSLKQAKITANK HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH IEDKEFKQEIDTLLTKLLTH HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA