Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is 148652633
Identifier: 148652633
GI number: 148652633
Start: 978614
End: 979201
Strand: Direct
Name: 148652633
Synonym: PsycPRwf_0824
Alternate gene names: NA
Gene position: 978614-979201 (Clockwise)
Preceding gene: 148652632
Following gene: 148652634
Centisome position: 32.85
GC content: 43.88
Gene sequence:
>588_bases ATGAATACCCGATTTTTATTTATCCTATCCTTGCTTGTGGCAGTGTTTGCGGTATGGTTTTATCGCAATCAGGGCGAGCT TGACTCGATTATCAACTTATCTACTACCAATATTGAGTATGAAGCTACCGATATTTTGGCAGTTCAGACCAATGATGATG GGGTGGCTGAGTATTCATTAGCTGCCGATACTTTGACCCATTATGCCGATCAAAACTTGGATAAATTGGAGGCGATGAAG CTTAACTGGCGCCCCAGTCCCAATCGCAGTGTGTTGATTAATGCTGACGAAGCGGTGATGTATCATGAACAATCCAAAGT GGTGATGACCAATAATGTGTTGTTCTCGAGCCAAACTGCCGCAAATAATCTGGACAATAAGCCGCCTATGAAATTAGTGG CTTCAGAGCTTATAGGCGATTTGGAACAAAAAAGGGTCTATAGCAACACGCCCATTAAAGTGACCCAAGGACAAAACAGC TTTGAATCTTCAAGATTTTTGGCAGATGTGAACACAGGTGATTACGAGTTTGCCCAAGTGGCGGTTACCTTCATGCCACC GGCCCGCAAAGACGTGCCCTTATTTTAG
Upstream 100 bases:
>100_bases AAAAGGTCATGGCAAGTACGAGCAATATATTAGCCAGTATGTGCTTGATTAATCAGCACTTAACACCATTTATTTTTTGT TATGGTCATAAAGAGGTGTA
Downstream 100 bases:
>100_bases ATAGCTGTCTATTTTAAATGACGACTTATTTTTGATAGCTACTTATTCATTATTGTAGATAGCTACTGACTTTAAATAAT TACTTTAGGCCATAATTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MNTRFLFILSLLVAVFAVWFYRNQGELDSIINLSTTNIEYEATDILAVQTNDDGVAEYSLAADTLTHYADQNLDKLEAMK LNWRPSPNRSVLINADEAVMYHEQSKVVMTNNVLFSSQTAANNLDNKPPMKLVASELIGDLEQKRVYSNTPIKVTQGQNS FESSRFLADVNTGDYEFAQVAVTFMPPARKDVPLF
Sequences:
>Translated_195_residues MNTRFLFILSLLVAVFAVWFYRNQGELDSIINLSTTNIEYEATDILAVQTNDDGVAEYSLAADTLTHYADQNLDKLEAMK LNWRPSPNRSVLINADEAVMYHEQSKVVMTNNVLFSSQTAANNLDNKPPMKLVASELIGDLEQKRVYSNTPIKVTQGQNS FESSRFLADVNTGDYEFAQVAVTFMPPARKDVPLF >Mature_195_residues MNTRFLFILSLLVAVFAVWFYRNQGELDSIINLSTTNIEYEATDILAVQTNDDGVAEYSLAADTLTHYADQNLDKLEAMK LNWRPSPNRSVLINADEAVMYHEQSKVVMTNNVLFSSQTAANNLDNKPPMKLVASELIGDLEQKRVYSNTPIKVTQGQNS FESSRFLADVNTGDYEFAQVAVTFMPPARKDVPLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21923; Mature: 21923
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTRFLFILSLLVAVFAVWFYRNQGELDSIINLSTTNIEYEATDILAVQTNDDGVAEYSL CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEEEEEEEEECCCCCEEHHH AADTLTHYADQNLDKLEAMKLNWRPSPNRSVLINADEAVMYHEQSKVVMTNNVLFSSQTA HHHHHHHHHCCCCCHHHEEEECCCCCCCCEEEEECCCEEEEECCCCEEEECCEEEECCCC ANNLDNKPPMKLVASELIGDLEQKRVYSNTPIKVTQGQNSFESSRFLADVNTGDYEFAQV CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCCCCEEEEEE AVTFMPPARKDVPLF EEEECCCCCCCCCCC >Mature Secondary Structure MNTRFLFILSLLVAVFAVWFYRNQGELDSIINLSTTNIEYEATDILAVQTNDDGVAEYSL CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEEEEEEEEECCCCCEEHHH AADTLTHYADQNLDKLEAMKLNWRPSPNRSVLINADEAVMYHEQSKVVMTNNVLFSSQTA HHHHHHHHHCCCCCHHHEEEECCCCCCCCEEEEECCCEEEEECCCCEEEECCEEEECCCC ANNLDNKPPMKLVASELIGDLEQKRVYSNTPIKVTQGQNSFESSRFLADVNTGDYEFAQV CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCCCCEEEEEE AVTFMPPARKDVPLF EEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA