Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is 148652547

Identifier: 148652547

GI number: 148652547

Start: 879585

End: 880634

Strand: Direct

Name: 148652547

Synonym: PsycPRwf_0738

Alternate gene names: NA

Gene position: 879585-880634 (Clockwise)

Preceding gene: 148652545

Following gene: 148652548

Centisome position: 29.53

GC content: 47.43

Gene sequence:

>1050_bases
ATGGAAGAGTTAGCCACCTTGGCAGATTTGCCAGCCGATTATGTCACAGACATTAACAGTAAAAATTTGGTTCCACTTTG
GCCAAGCCTACGTGATGTTCTTCCTCCTCTGAGTCCTAAACCTCGTACCAAACCCACGCTTTGGGCGTATAAAGATATTC
GTGGACCACTTTTAAAGTCTGGTGAGTTAACACCGGTTGAAAAAGCGGAGCGTCGAGTATTGGTACTGGCTAACCCTGGG
CTTGGACTTGACAATATGTCAGCAAGTCCAGTGATTTATCTGGGCATGCAGTTGCTACTGCCAGGTGAATGGGCACCTTC
TCATCGTCACACCCCCAATGCCGTACGCTTAATTGTTGAAGGGGATGGGGCGTACACCACCATTGATGGGATAAAATGCC
CCATGGAACATGGCGACTTGATTTTAACCCCCTCTGGTACTTGGCATGAACATGGTCACGATGGCGATGAGCCTGTCATT
TGGTTAGATATTTTAGATTTGCCGCTGGTTTATTATAGCGAAGCTACCTATGTAGAGCCTATCGGTCGCCAACAAGTCGA
GTCCACCTCCATCAACTCTCCCTATGTCAATGGGATCGTACCTGTCAAAAACTTTGTCCGTAATGATGCGGCATATCCCA
TCTTACGTTATCGCTGGCGTGATGTTAAACATGCGCTGCACACGATAGCTGAGAATGAGCCAGACGTTGAAATCGTACAA
GTAGCGTATACCAACCCTGAAAATGGTCAACCTGCTGAGCAGATTATCGGCTTTAGCTGTATCATGCTACGCCCCAATGA
AACGGTTAAGCTTGTCAAGCGCTCGTGTGCCATGGCGTTTCATGTCATCGATGGTGATATGAAAATGACCATCAATAATG
CAAATGACGTACAAGACTTTACCATGACACGCTCTGACACCAGTGTAGCCCCTTGTTTTGCCGAGGTCGACTTAACGAAC
TTAAGCGACAAGCCTTGCTACGTCTTTGTGGCAGATGAAGCCCCATTCCAGCAAAAAATTGGGGTGTATTCGGAGCGTGA
ACGGGGTTAG

Upstream 100 bases:

>100_bases
TATTTTTAATAGAGTGAATTATTTTGATTGCATAGATGAAACAGATAGTGGGTGATACAGTATAAAAATAGTCAATCACT
ATTTTTATGGAGTCTCCCTC

Downstream 100 bases:

>100_bases
TCGTCTTTTGACCAACACATATTGACCAACACATTAAAAATAAAACGCTGATATCAAAAGCTCACGTTTGTTAACTAGGG
GGCTATTTTACGCCCTATTA

Product: cupin 2 domain-containing protein

Products: NA

Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Barrel; Gentisate 1 2-Dioxygenase Oxidoreductase; Cupin 2 Conserved Barrel Domain-Containing Protein; 1 2-Dioxygenase; Dioxygenase Oxidoreductase Protein; Gentisate 1 2-Dioxygenase Oxidoreductase Protein; Dioxygenase; Cupin 2 Protein; 1-Hydroxy-2-Naphthoate Dioxygenase

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MEELATLADLPADYVTDINSKNLVPLWPSLRDVLPPLSPKPRTKPTLWAYKDIRGPLLKSGELTPVEKAERRVLVLANPG
LGLDNMSASPVIYLGMQLLLPGEWAPSHRHTPNAVRLIVEGDGAYTTIDGIKCPMEHGDLILTPSGTWHEHGHDGDEPVI
WLDILDLPLVYYSEATYVEPIGRQQVESTSINSPYVNGIVPVKNFVRNDAAYPILRYRWRDVKHALHTIAENEPDVEIVQ
VAYTNPENGQPAEQIIGFSCIMLRPNETVKLVKRSCAMAFHVIDGDMKMTINNANDVQDFTMTRSDTSVAPCFAEVDLTN
LSDKPCYVFVADEAPFQQKIGVYSERERG

Sequences:

>Translated_349_residues
MEELATLADLPADYVTDINSKNLVPLWPSLRDVLPPLSPKPRTKPTLWAYKDIRGPLLKSGELTPVEKAERRVLVLANPG
LGLDNMSASPVIYLGMQLLLPGEWAPSHRHTPNAVRLIVEGDGAYTTIDGIKCPMEHGDLILTPSGTWHEHGHDGDEPVI
WLDILDLPLVYYSEATYVEPIGRQQVESTSINSPYVNGIVPVKNFVRNDAAYPILRYRWRDVKHALHTIAENEPDVEIVQ
VAYTNPENGQPAEQIIGFSCIMLRPNETVKLVKRSCAMAFHVIDGDMKMTINNANDVQDFTMTRSDTSVAPCFAEVDLTN
LSDKPCYVFVADEAPFQQKIGVYSERERG
>Mature_349_residues
MEELATLADLPADYVTDINSKNLVPLWPSLRDVLPPLSPKPRTKPTLWAYKDIRGPLLKSGELTPVEKAERRVLVLANPG
LGLDNMSASPVIYLGMQLLLPGEWAPSHRHTPNAVRLIVEGDGAYTTIDGIKCPMEHGDLILTPSGTWHEHGHDGDEPVI
WLDILDLPLVYYSEATYVEPIGRQQVESTSINSPYVNGIVPVKNFVRNDAAYPILRYRWRDVKHALHTIAENEPDVEIVQ
VAYTNPENGQPAEQIIGFSCIMLRPNETVKLVKRSCAMAFHVIDGDMKMTINNANDVQDFTMTRSDTSVAPCFAEVDLTN
LSDKPCYVFVADEAPFQQKIGVYSERERG

Specific function: Unknown

COG id: COG3435

COG function: function code Q; Gentisate 1,2-dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38927; Mature: 38927

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEELATLADLPADYVTDINSKNLVPLWPSLRDVLPPLSPKPRTKPTLWAYKDIRGPLLKS
CCHHHHHHHCCHHHHHCCCCCCEEECCCCHHHHCCCCCCCCCCCCCEEEEHHCCCCCCCC
GELTPVEKAERRVLVLANPGLGLDNMSASPVIYLGMQLLLPGEWAPSHRHTPNAVRLIVE
CCCCCHHHCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEE
GDGAYTTIDGIKCPMEHGDLILTPSGTWHEHGHDGDEPVIWLDILDLPLVYYSEATYVEP
CCCCEEEECCEECCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCEECC
IGRQQVESTSINSPYVNGIVPVKNFVRNDAAYPILRYRWRDVKHALHTIAENEPDVEIVQ
CCCHHHHHCCCCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE
VAYTNPENGQPAEQIIGFSCIMLRPNETVKLVKRSCAMAFHVIDGDMKMTINNANDVQDF
EEECCCCCCCCHHHHCCEEEEEECCCHHHHHHHHHHHEEEEEECCCEEEEECCCCCCCCE
TMTRSDTSVAPCFAEVDLTNLSDKPCYVFVADEAPFQQKIGVYSERERG
EEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MEELATLADLPADYVTDINSKNLVPLWPSLRDVLPPLSPKPRTKPTLWAYKDIRGPLLKS
CCHHHHHHHCCHHHHHCCCCCCEEECCCCHHHHCCCCCCCCCCCCCEEEEHHCCCCCCCC
GELTPVEKAERRVLVLANPGLGLDNMSASPVIYLGMQLLLPGEWAPSHRHTPNAVRLIVE
CCCCCHHHCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEE
GDGAYTTIDGIKCPMEHGDLILTPSGTWHEHGHDGDEPVIWLDILDLPLVYYSEATYVEP
CCCCEEEECCEECCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCEECC
IGRQQVESTSINSPYVNGIVPVKNFVRNDAAYPILRYRWRDVKHALHTIAENEPDVEIVQ
CCCHHHHHCCCCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE
VAYTNPENGQPAEQIIGFSCIMLRPNETVKLVKRSCAMAFHVIDGDMKMTINNANDVQDF
EEECCCCCCCCHHHHCCEEEEEECCCHHHHHHHHHHHEEEEEECCCEEEEECCCCCCCCE
TMTRSDTSVAPCFAEVDLTNLSDKPCYVFVADEAPFQQKIGVYSERERG
EEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA