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The map label for this gene is insF1 [C]

Identifier: 148652541

GI number: 148652541

Start: 873596

End: 874450

Strand: Direct

Name: insF1 [C]

Synonym: PsycPRwf_0731

Alternate gene names: 148652541

Gene position: 873596-874450 (Clockwise)

Preceding gene: 148652540

Following gene: 148652542

Centisome position: 29.33

GC content: 43.86

Gene sequence:

>855_bases
ATGCAAGAGAATCGATTGAAATACTGCATACAACGTATGGCGACCGTATTTGAAGTCAGCCTATCAGGCTACTATGACTG
GCTAAAGCGAGGCATGAGCAAGCGAAAACAGCACCACAATCGCTGTGAGTTACTGGTCAAATCCGCTCATATGGATACAC
AGCAAAGCTATGGGCATGAACGCTTGCATCAGCATTTAACCAGCCAAGGACACGACATCAGCCTGTACATGGTTCGGCAA
ATCAAGCAAGAACATGGTATTTACTGCAAACGCCACAAGCGATCTAAGGTGACTACTGACTCAAATCATAATAAGCCTGT
GTATCCAAACTTGTTAGAACAGCAGTTTGACGTGGCAGCACCCAATATCGCTTGGGTTAGCGATATTACCTATATTTGGA
CCAATGAAGGCTGGGTGTACTTGGCAGCGTTCAAAGACTTGTACAGCAAAGAGATTGTGGGATATGCTCTAAATAAGCGT
ATGACCGCTGATTTGGTTTGTGAGGCTTTAAACAATGCCATTAAGTACAAACGCCCTGCTCGGGGCTTAATCGTGCATTC
TGACAGGGGTAGTCAGTATTGTAGCCATCAATACCGCCAAATCATCGACAAGTATGGTTTTGCTGGCTCTATGAGCCGAA
AAGGCAATTGCTACGATAACGCCCCGATTGAAAGCTTCTGGGGTCAGTTAAAAAACGAGCTGATTTATCACAAAGTCTAT
GAGACTCGTGATGAAGCCATTAAGGATGTGGTTAGATATATTGAGATTTTTTACAACCGTCAACGAATACAAAAAGGGTT
AGGATTTAAGTCACCTACTCAAGTATTCCAAGACTTTTACCGTCAGGCTGCCTGA

Upstream 100 bases:

>100_bases
AAGACCTAAAAAAACAACTAAGAATCGCTCAAGAGGAACGAGAAATTCTAAAAAAGGCAACGGCGTACTTTGCCAAGAAT
CAATAGCCAAGTACGCCTTT

Downstream 100 bases:

>100_bases
TGAAATCTACCAAATGTTTTTCTCCGTTGTTGACAGCAGAGGTCAAGATTGAGACAGTTTATAAAAACGTATCTATTTTG
GTGAAAAAAATGTTAAATAA

Product: integrase catalytic subunit

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MQENRLKYCIQRMATVFEVSLSGYYDWLKRGMSKRKQHHNRCELLVKSAHMDTQQSYGHERLHQHLTSQGHDISLYMVRQ
IKQEHGIYCKRHKRSKVTTDSNHNKPVYPNLLEQQFDVAAPNIAWVSDITYIWTNEGWVYLAAFKDLYSKEIVGYALNKR
MTADLVCEALNNAIKYKRPARGLIVHSDRGSQYCSHQYRQIIDKYGFAGSMSRKGNCYDNAPIESFWGQLKNELIYHKVY
ETRDEAIKDVVRYIEIFYNRQRIQKGLGFKSPTQVFQDFYRQAA

Sequences:

>Translated_284_residues
MQENRLKYCIQRMATVFEVSLSGYYDWLKRGMSKRKQHHNRCELLVKSAHMDTQQSYGHERLHQHLTSQGHDISLYMVRQ
IKQEHGIYCKRHKRSKVTTDSNHNKPVYPNLLEQQFDVAAPNIAWVSDITYIWTNEGWVYLAAFKDLYSKEIVGYALNKR
MTADLVCEALNNAIKYKRPARGLIVHSDRGSQYCSHQYRQIIDKYGFAGSMSRKGNCYDNAPIESFWGQLKNELIYHKVY
ETRDEAIKDVVRYIEIFYNRQRIQKGLGFKSPTQVFQDFYRQAA
>Mature_284_residues
MQENRLKYCIQRMATVFEVSLSGYYDWLKRGMSKRKQHHNRCELLVKSAHMDTQQSYGHERLHQHLTSQGHDISLYMVRQ
IKQEHGIYCKRHKRSKVTTDSNHNKPVYPNLLEQQFDVAAPNIAWVSDITYIWTNEGWVYLAAFKDLYSKEIVGYALNKR
MTADLVCEALNNAIKYKRPARGLIVHSDRGSQYCSHQYRQIIDKYGFAGSMSRKGNCYDNAPIESFWGQLKNELIYHKVY
ETRDEAIKDVVRYIEIFYNRQRIQKGLGFKSPTQVFQDFYRQAA

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=256, Percent_Identity=30.46875, Blast_Score=118, Evalue=7e-27,
Organism=Escherichia coli, GI1788405, Length=276, Percent_Identity=38.0434782608696, Blast_Score=201, Evalue=3e-53,
Organism=Escherichia coli, GI1787263, Length=276, Percent_Identity=38.0434782608696, Blast_Score=201, Evalue=3e-53,
Organism=Escherichia coli, GI1786753, Length=276, Percent_Identity=38.0434782608696, Blast_Score=201, Evalue=3e-53,
Organism=Escherichia coli, GI1786570, Length=276, Percent_Identity=38.0434782608696, Blast_Score=201, Evalue=3e-53,
Organism=Escherichia coli, GI1786490, Length=276, Percent_Identity=38.0434782608696, Blast_Score=201, Evalue=3e-53,
Organism=Escherichia coli, GI1789981, Length=280, Percent_Identity=30.3571428571429, Blast_Score=124, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 33542; Mature: 33542

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQENRLKYCIQRMATVFEVSLSGYYDWLKRGMSKRKQHHNRCELLVKSAHMDTQQSYGHE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RLHQHLTSQGHDISLYMVRQIKQEHGIYCKRHKRSKVTTDSNHNKPVYPNLLEQQFDVAA
HHHHHHHCCCCCCHHHHHHHHHHHCCCEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCC
PNIAWVSDITYIWTNEGWVYLAAFKDLYSKEIVGYALNKRMTADLVCEALNNAIKYKRPA
CCEEHHHCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
RGLIVHSDRGSQYCSHQYRQIIDKYGFAGSMSRKGNCYDNAPIESFWGQLKNELIYHKVY
CCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ETRDEAIKDVVRYIEIFYNRQRIQKGLGFKSPTQVFQDFYRQAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MQENRLKYCIQRMATVFEVSLSGYYDWLKRGMSKRKQHHNRCELLVKSAHMDTQQSYGHE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RLHQHLTSQGHDISLYMVRQIKQEHGIYCKRHKRSKVTTDSNHNKPVYPNLLEQQFDVAA
HHHHHHHCCCCCCHHHHHHHHHHHCCCEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCC
PNIAWVSDITYIWTNEGWVYLAAFKDLYSKEIVGYALNKRMTADLVCEALNNAIKYKRPA
CCEEHHHCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
RGLIVHSDRGSQYCSHQYRQIIDKYGFAGSMSRKGNCYDNAPIESFWGQLKNELIYHKVY
CCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ETRDEAIKDVVRYIEIFYNRQRIQKGLGFKSPTQVFQDFYRQAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]