Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is narK [H]
Identifier: 148652477
GI number: 148652477
Start: 805820
End: 807202
Strand: Direct
Name: narK [H]
Synonym: PsycPRwf_0665
Alternate gene names: 148652477
Gene position: 805820-807202 (Clockwise)
Preceding gene: 148652474
Following gene: 148652478
Centisome position: 27.05
GC content: 48.45
Gene sequence:
>1383_bases ATGGGTGTGAATAAAGAAGACTTAAAAGGGGGCAAGCTCATCACTGACTGGCGCCCAGAAATGGAAGATTTTTGGGAAAA CGGTGGTAAGCAGGTCGCCAGCCGCAACTTATGGGTGTCTATCCCAGCACTGCTATTGGCCTTTGCGGTATGGATGGTCT GGAGTGCGGTGATTGTTAACTTGCCTGAGATTGGCTTTGGCTTTGATGAGGGGCAGCTGTTTTGGCTGGCCGCTTTACCA GGATTGTCTGGGGCGACGCTGCGTATTTTTTATTCGTTTATGGTGCCTATCTTTGGTGGACGTCGCTGGACGGCCATCTC TACCGCGTCACTGCTTATCCCTGCAGTGTGGATGGGCTTTGCGGTTCAAAATCCTGATACGCCCTTTAGCGTGTTTGCCA TGATTGCACTACTGTGCGGCTTTGGTGGCGCAAACTTTGCGTCCTCTATGTCCAACATCTCGTTTTTTTATCCTAAAGAT AAGCAAGGCACAGCACTGGGTTTAAACGCAGGTCTGGGTAACCTAGGTGTGTCTGTGATGCAGTTTGTGGTGCCTTTGGT AATCGGTTTTGGTGTGTTTGGCGCACTTGGCGGTGCACCGCAAGTCACTGAAGCGGGCAAAGCACTTTATCTGCAAAATG CAGGCTTTATCTGGGTGCCTTTTATTGCACTGGTCTCTATTGCTGCTTGGTTTTTGATGAATGATATCGCCTCGGCAAAG GCATCGTTTAAAGATCAAGCGGTTATCTTTAAGCGCAAGCACAACTGGATCATGTGTGTGCTATATATGGCCACCTTTGG CTCGTTTATTGGCTTTTCGGCCGCCTTTCCGATGCTGATTAAAAAAGGATTTCCGGATGTCAATGCGTTGCAATTTGCCT TTTTAGGCCCCTTAGTCGGTGCGTTATTCCGTCCTGCAGGTGGCTGGATTGCTGATAAATTGGGCGGCGCCCGAGTGACA TTCTGGAACTATGTGGTGATGATATTGGCCGTAGTGGCGGTGATGTACTTCTTGCCAAGTGGCACCAGTGCCGGTAGCTT TACGGGGTATCTGATCTCATTTATGGTACTGTTTGTCACCACAGGGATTGGTAATGGCTCAACCTTCCGTATGATTCCAG TTATCTTTAGAACGGTATTAGAGCGTGAGCATCCTGACAAAGTAGGCACAGAGCCTTTGTTTGTTGAGATTCGCAAAGAG TCAGCAGCAGTGGTGGGCTTTACCTCAGCAGTAGCGGCTTATGGTGCTTTCTTTGTGCCTAAGATGTTTGGCTCAGGCTT AGGTGTCAATGGCACATTCATCGCTTTGATTGCCTATTATGTGGTTTGTATTGTCTTAACCTGGTGGTATTACAGCCGCA AAAATGCAGAGTATCCGTCATAG
Upstream 100 bases:
>100_bases ACCCTTATAACCATATTAAATTCATGATGGCTGAAGTACCTTAACTTATCGAACAACAAGCCGTGACTGTGAGTTATCAA CAGTACTAAGTGAGGTAAGT
Downstream 100 bases:
>100_bases GGCTATATTGTAGGGCTATAATGGTAAGACACACAATGTAGTTATTTAGGACTTACGCAGGATTAGGGATTTTAGCGATT GGGTATTATTTTCTCGCTTG
Product: nitrite transporter
Products: NA
Alternate protein names: Nitrite facilitator 1 [H]
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MGVNKEDLKGGKLITDWRPEMEDFWENGGKQVASRNLWVSIPALLLAFAVWMVWSAVIVNLPEIGFGFDEGQLFWLAALP GLSGATLRIFYSFMVPIFGGRRWTAISTASLLIPAVWMGFAVQNPDTPFSVFAMIALLCGFGGANFASSMSNISFFYPKD KQGTALGLNAGLGNLGVSVMQFVVPLVIGFGVFGALGGAPQVTEAGKALYLQNAGFIWVPFIALVSIAAWFLMNDIASAK ASFKDQAVIFKRKHNWIMCVLYMATFGSFIGFSAAFPMLIKKGFPDVNALQFAFLGPLVGALFRPAGGWIADKLGGARVT FWNYVVMILAVVAVMYFLPSGTSAGSFTGYLISFMVLFVTTGIGNGSTFRMIPVIFRTVLEREHPDKVGTEPLFVEIRKE SAAVVGFTSAVAAYGAFFVPKMFGSGLGVNGTFIALIAYYVVCIVLTWWYYSRKNAEYPS
Sequences:
>Translated_460_residues MGVNKEDLKGGKLITDWRPEMEDFWENGGKQVASRNLWVSIPALLLAFAVWMVWSAVIVNLPEIGFGFDEGQLFWLAALP GLSGATLRIFYSFMVPIFGGRRWTAISTASLLIPAVWMGFAVQNPDTPFSVFAMIALLCGFGGANFASSMSNISFFYPKD KQGTALGLNAGLGNLGVSVMQFVVPLVIGFGVFGALGGAPQVTEAGKALYLQNAGFIWVPFIALVSIAAWFLMNDIASAK ASFKDQAVIFKRKHNWIMCVLYMATFGSFIGFSAAFPMLIKKGFPDVNALQFAFLGPLVGALFRPAGGWIADKLGGARVT FWNYVVMILAVVAVMYFLPSGTSAGSFTGYLISFMVLFVTTGIGNGSTFRMIPVIFRTVLEREHPDKVGTEPLFVEIRKE SAAVVGFTSAVAAYGAFFVPKMFGSGLGVNGTFIALIAYYVVCIVLTWWYYSRKNAEYPS >Mature_459_residues GVNKEDLKGGKLITDWRPEMEDFWENGGKQVASRNLWVSIPALLLAFAVWMVWSAVIVNLPEIGFGFDEGQLFWLAALPG LSGATLRIFYSFMVPIFGGRRWTAISTASLLIPAVWMGFAVQNPDTPFSVFAMIALLCGFGGANFASSMSNISFFYPKDK QGTALGLNAGLGNLGVSVMQFVVPLVIGFGVFGALGGAPQVTEAGKALYLQNAGFIWVPFIALVSIAAWFLMNDIASAKA SFKDQAVIFKRKHNWIMCVLYMATFGSFIGFSAAFPMLIKKGFPDVNALQFAFLGPLVGALFRPAGGWIADKLGGARVTF WNYVVMILAVVAVMYFLPSGTSAGSFTGYLISFMVLFVTTGIGNGSTFRMIPVIFRTVLEREHPDKVGTEPLFVEIRKES AAVVGFTSAVAAYGAFFVPKMFGSGLGVNGTFIALIAYYVVCIVLTWWYYSRKNAEYPS
Specific function: Involved in excretion of nitrite produced by the dissimilatory reduction of nitrate [H]
COG id: COG2223
COG function: function code P; Nitrate/nitrite transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family [H]
Homologues:
Organism=Escherichia coli, GI1787475, Length=452, Percent_Identity=55.0884955752212, Blast_Score=473, Evalue=1e-135, Organism=Escherichia coli, GI1787743, Length=458, Percent_Identity=54.585152838428, Blast_Score=437, Evalue=1e-124,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004737 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49967; Mature: 49836
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVNKEDLKGGKLITDWRPEMEDFWENGGKQVASRNLWVSIPALLLAFAVWMVWSAVIVN CCCCCCCCCCCCEEECCCCCHHHHHHCCCHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHC LPEIGFGFDEGQLFWLAALPGLSGATLRIFYSFMVPIFGGRRWTAISTASLLIPAVWMGF CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHH AVQNPDTPFSVFAMIALLCGFGGANFASSMSNISFFYPKDKQGTALGLNAGLGNLGVSVM EECCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCEEECCCCCCCCEEEECCCCHHHHHHHH QFVVPLVIGFGVFGALGGAPQVTEAGKALYLQNAGFIWVPFIALVSIAAWFLMNDIASAK HHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH ASFKDQAVIFKRKHNWIMCVLYMATFGSFIGFSAAFPMLIKKGFPDVNALQFAFLGPLVG HCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH ALFRPAGGWIADKLGGARVTFWNYVVMILAVVAVMYFLPSGTSAGSFTGYLISFMVLFVT HHHCCCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH TGIGNGSTFRMIPVIFRTVLEREHPDKVGTEPLFVEIRKESAAVVGFTSAVAAYGAFFVP CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHH KMFGSGLGVNGTFIALIAYYVVCIVLTWWYYSRKNAEYPS HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GVNKEDLKGGKLITDWRPEMEDFWENGGKQVASRNLWVSIPALLLAFAVWMVWSAVIVN CCCCCCCCCCCEEECCCCCHHHHHHCCCHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHC LPEIGFGFDEGQLFWLAALPGLSGATLRIFYSFMVPIFGGRRWTAISTASLLIPAVWMGF CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHH AVQNPDTPFSVFAMIALLCGFGGANFASSMSNISFFYPKDKQGTALGLNAGLGNLGVSVM EECCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCEEECCCCCCCCEEEECCCCHHHHHHHH QFVVPLVIGFGVFGALGGAPQVTEAGKALYLQNAGFIWVPFIALVSIAAWFLMNDIASAK HHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH ASFKDQAVIFKRKHNWIMCVLYMATFGSFIGFSAAFPMLIKKGFPDVNALQFAFLGPLVG HCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH ALFRPAGGWIADKLGGARVTFWNYVVMILAVVAVMYFLPSGTSAGSFTGYLISFMVLFVT HHHCCCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH TGIGNGSTFRMIPVIFRTVLEREHPDKVGTEPLFVEIRKESAAVVGFTSAVAAYGAFFVP CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHH KMFGSGLGVNGTFIALIAYYVVCIVLTWWYYSRKNAEYPS HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2668029; 8905232; 9278503; 2657652 [H]