Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is 148652152
Identifier: 148652152
GI number: 148652152
Start: 410910
End: 411389
Strand: Direct
Name: 148652152
Synonym: PsycPRwf_0340
Alternate gene names: NA
Gene position: 410910-411389 (Clockwise)
Preceding gene: 148652151
Following gene: 148652153
Centisome position: 13.79
GC content: 42.71
Gene sequence:
>480_bases ATGAGTAACAGTAGTGGTGTGGACTTTGATCAAGATATTTTTGCTGCGTTAATTGCTAAGCATGACATTCAGCGCGATCT GTGTGATCAATTAGAAAAACAAAGCGATAACGATAAGCGCAAAGCACTCTATCAAGAACTAAAACTTGAGCTGCAAGCGC ATGCGGCGGCTGAAGAGCGCCATCTATATATTCCGGTAATGCAGCATGATGAAGGCCTAGATTTATCACGTCATGCCATC ACCGAGCATCATGAGATGGACGAGATGATGGAAACGCTAGATGATGGTCGTATCAGTCAAAAGACTTGGGACACCACCTG TGCTGACTTAATTGAAAAAGTACGCCATCACCTAACCGAAGAAGAACAAAAATTCTTTAAACAAGCCCGCAAAATCTTGG ATAGCGATTTGCAGCAGCGTCTGGGGGCATTGTATCAAGTAGAGCATGATGAATTTGAAAAAACCCATGCCAATGATTAA
Upstream 100 bases:
>100_bases TCTATAATAATTTGATAAGCCGCTGGTTATAATATAGGTTTTTAGGTTATAGCCCGCTTAGCTAATTTGAAGCATTTATG GATAAATTTTGGAGAGAGCG
Downstream 100 bases:
>100_bases GCTTGTGTGGCCAAAGCAAGTTCAAAAACCCACTTTTTAGTGGGTTTTTTATGGTCAGTATACAAATAAATTGTAACGAC CGGTCTAATCTGCTTTAAAT
Product: hemerythrin HHE cation binding domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSNSSGVDFDQDIFAALIAKHDIQRDLCDQLEKQSDNDKRKALYQELKLELQAHAAAEERHLYIPVMQHDEGLDLSRHAI TEHHEMDEMMETLDDGRISQKTWDTTCADLIEKVRHHLTEEEQKFFKQARKILDSDLQQRLGALYQVEHDEFEKTHAND
Sequences:
>Translated_159_residues MSNSSGVDFDQDIFAALIAKHDIQRDLCDQLEKQSDNDKRKALYQELKLELQAHAAAEERHLYIPVMQHDEGLDLSRHAI TEHHEMDEMMETLDDGRISQKTWDTTCADLIEKVRHHLTEEEQKFFKQARKILDSDLQQRLGALYQVEHDEFEKTHAND >Mature_158_residues SNSSGVDFDQDIFAALIAKHDIQRDLCDQLEKQSDNDKRKALYQELKLELQAHAAAEERHLYIPVMQHDEGLDLSRHAIT EHHEMDEMMETLDDGRISQKTWDTTCADLIEKVRHHLTEEEQKFFKQARKILDSDLQQRLGALYQVEHDEFEKTHAND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18642; Mature: 18511
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSSGVDFDQDIFAALIAKHDIQRDLCDQLEKQSDNDKRKALYQELKLELQAHAAAEER CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC HLYIPVMQHDEGLDLSRHAITEHHEMDEMMETLDDGRISQKTWDTTCADLIEKVRHHLTE EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCH EEQKFFKQARKILDSDLQQRLGALYQVEHDEFEKTHAND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SNSSGVDFDQDIFAALIAKHDIQRDLCDQLEKQSDNDKRKALYQELKLELQAHAAAEER CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC HLYIPVMQHDEGLDLSRHAITEHHEMDEMMETLDDGRISQKTWDTTCADLIEKVRHHLTE EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCH EEQKFFKQARKILDSDLQQRLGALYQVEHDEFEKTHAND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA