Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is 148651880
Identifier: 148651880
GI number: 148651880
Start: 75685
End: 76128
Strand: Direct
Name: 148651880
Synonym: PsycPRwf_0063
Alternate gene names: NA
Gene position: 75685-76128 (Clockwise)
Preceding gene: 148651879
Following gene: 148651886
Centisome position: 2.54
GC content: 44.14
Gene sequence:
>444_bases ATGACAAGTGCGGTACAACCTGAACAAAAAATGCGTAGCAGAAACGACAGAATCCGTCATGCCCTAGGCTTTGAGATTCT AGGGCTGATGCTGTTTGCCCCTTTGGGGAGCTGGGTGTTTGGCTATGAGCTGCATACCATGGGGGTTATCGCTGTGGCGG CCTCTATTGTTGCCACAGTTTGGAACTACTTTTATAACATATTATTCGATAATGCCATGGTTAAGCTGCGCGGCAGTGTC CACAAAACCCTCCTTATTCGCATCTTACATGCGCTGTTGTTTGAGGGCGGACTGTTGTTATTGTTTATGCCGATCATTGC TTGGTATTTGGGTATCACCTTATGGGAGGCCTTCATTATGGATATCGCAATGGCGCTGTTTTATTTGGTTTATGCCTTTT TTTATAACATTGCTTATGACAAAGTATTTCCTATTGATCGCTAA
Upstream 100 bases:
>100_bases GACGACTGATACTATCAATTGCAACTACTCTCAACCATAAGCCGCTGTCGGCTTAAGCCAAAAGTTTTTAGAATAAAATG ATGCGCCATAAAGGATAAAA
Downstream 100 bases:
>100_bases ATAAAAATGCCCGACCAATTGGCCGGGCATTTTTATTCACACTAAGATCAATACAAGATTAAGCCATTAGGCTTGGTTTT CTGCTGCCAGTTGACGCAGT
Product: transmembrane pair domain-containing protein
Products: NA
Alternate protein names: Transmembrane Pair Domain Protein; Transmembrane Pair; Transmembrane Pair Permease Of Facilitator Superfamily; Transmembrane Pair Protein; Transmembrane Pair Family Protein
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MTSAVQPEQKMRSRNDRIRHALGFEILGLMLFAPLGSWVFGYELHTMGVIAVAASIVATVWNYFYNILFDNAMVKLRGSV HKTLLIRILHALLFEGGLLLLFMPIIAWYLGITLWEAFIMDIAMALFYLVYAFFYNIAYDKVFPIDR
Sequences:
>Translated_147_residues MTSAVQPEQKMRSRNDRIRHALGFEILGLMLFAPLGSWVFGYELHTMGVIAVAASIVATVWNYFYNILFDNAMVKLRGSV HKTLLIRILHALLFEGGLLLLFMPIIAWYLGITLWEAFIMDIAMALFYLVYAFFYNIAYDKVFPIDR >Mature_146_residues TSAVQPEQKMRSRNDRIRHALGFEILGLMLFAPLGSWVFGYELHTMGVIAVAASIVATVWNYFYNILFDNAMVKLRGSVH KTLLIRILHALLFEGGLLLLFMPIIAWYLGITLWEAFIMDIAMALFYLVYAFFYNIAYDKVFPIDR
Specific function: Unknown
COG id: COG4125
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16948; Mature: 16816
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAVQPEQKMRSRNDRIRHALGFEILGLMLFAPLGSWVFGYELHTMGVIAVAASIVATV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WNYFYNILFDNAMVKLRGSVHKTLLIRILHALLFEGGLLLLFMPIIAWYLGITLWEAFIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH DIAMALFYLVYAFFYNIAYDKVFPIDR HHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TSAVQPEQKMRSRNDRIRHALGFEILGLMLFAPLGSWVFGYELHTMGVIAVAASIVATV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WNYFYNILFDNAMVKLRGSVHKTLLIRILHALLFEGGLLLLFMPIIAWYLGITLWEAFIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH DIAMALFYLVYAFFYNIAYDKVFPIDR HHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA