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The map label for this gene is ybaW [C]

Identifier: 148550826

GI number: 148550826

Start: 298337

End: 298756

Strand: Reverse

Name: ybaW [C]

Synonym: Swit_5390

Alternate gene names: 148550826

Gene position: 298756-298337 (Counterclockwise)

Preceding gene: 148550827

Following gene: 148550825

Centisome position: 96.3

GC content: 62.62

Gene sequence:

>420_bases
ATGACCACCGCGATTCCCCACGCTTTCGAGATCGGCATCGATCCCTCCGACATCGACTTCATGGGTCATGTCAACAATGC
CAGCTACCTCAAATGGGTACAGGATGCCGTACTCGATCACTGGCGCTCGCTCGCACCCAGGGAGGCCGTCGCGGCCCATC
TCTGGGTCGCGCTCAAGCATGAGATCACCTATCGGCGTCCGACCTTTCTCGACGACCGCGTCATCGCCACGGTCCTGCTG
GAAAAGGTTCAGGGCGCCCGCGCCTTCTACGATACGGTGATCCGTCGAGGCGAAGAGGTGCTCGCCGAAGTGAAGTCGAG
CTGGTGCTGCATCGATGCGGCCACCCTGCGTCCCGCCCGCCTGGCGCGGGAGGTGATCCAGCACTTTTTCACCGCCGATC
CCCCTGGCGCTTCAGCTTGA

Upstream 100 bases:

>100_bases
AATGCCGGGCCGCGCGTCGAACTTCGCGCCGCCGACGCTTGATCACCAACGTCTCGATAAGGGAACGGCCTTCCAGCCTG
CTTGTGCTATGACAAGGACC

Downstream 100 bases:

>100_bases
ACATAGCTGCCCACCAGCCCGTCTGGGGGCATCCGAACCGAATAATGAGCTTCCGGCACGCCTGTTCGTCGGAGCGCGAT
CTGGAGTTTACGAAACACAA

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Thioesterase; 4-Hydroxybenzoyl-CoA Thioesterase Domain Protein; Acyl-ACP Thioesterase; Thioesterase-Like; Thioesterase Family Protein

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MTTAIPHAFEIGIDPSDIDFMGHVNNASYLKWVQDAVLDHWRSLAPREAVAAHLWVALKHEITYRRPTFLDDRVIATVLL
EKVQGARAFYDTVIRRGEEVLAEVKSSWCCIDAATLRPARLAREVIQHFFTADPPGASA

Sequences:

>Translated_139_residues
MTTAIPHAFEIGIDPSDIDFMGHVNNASYLKWVQDAVLDHWRSLAPREAVAAHLWVALKHEITYRRPTFLDDRVIATVLL
EKVQGARAFYDTVIRRGEEVLAEVKSSWCCIDAATLRPARLAREVIQHFFTADPPGASA
>Mature_138_residues
TTAIPHAFEIGIDPSDIDFMGHVNNASYLKWVQDAVLDHWRSLAPREAVAAHLWVALKHEITYRRPTFLDDRVIATVLLE
KVQGARAFYDTVIRRGEEVLAEVKSSWCCIDAATLRPARLAREVIQHFFTADPPGASA

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15625; Mature: 15494

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAIPHAFEIGIDPSDIDFMGHVNNASYLKWVQDAVLDHWRSLAPREAVAAHLWVALKH
CCCCCCCCEECCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EITYRRPTFLDDRVIATVLLEKVQGARAFYDTVIRRGEEVLAEVKSSWCCIDAATLRPAR
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHCCHHH
LAREVIQHFFTADPPGASA
HHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TTAIPHAFEIGIDPSDIDFMGHVNNASYLKWVQDAVLDHWRSLAPREAVAAHLWVALKH
CCCCCCCEECCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EITYRRPTFLDDRVIATVLLEKVQGARAFYDTVIRRGEEVLAEVKSSWCCIDAATLRPAR
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHCCHHH
LAREVIQHFFTADPPGASA
HHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA