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The map label for this gene is traW [H]

Identifier: 148550811

GI number: 148550811

Start: 281573

End: 282226

Strand: Direct

Name: traW [H]

Synonym: Swit_5375

Alternate gene names: 148550811

Gene position: 281573-282226 (Clockwise)

Preceding gene: 148550810

Following gene: 148550812

Centisome position: 90.76

GC content: 63.91

Gene sequence:

>654_bases
ATGACGCGCACCATCCTGCTGGCGGCGACAACCGCATGCCTGGGCGGCGCGACCCTGTTTCTTGTCGGCTCCGCCAGCGA
GGCGCGCGATTATGGAACGGCAGGGCAGGCCTTTCCGATCATCGAGCCTGACCTGCTTGCGACGATCGAGGCGCGGCTGC
GCCATGCCGAAGCGAGCGGCGAACTGGCGCGAACCAATGCGCTCTTCGCCAAGCGGGTTGAGGCCAAGGTCCGGCGGCCT
GATCCCGTCGCCGGTATCTCGCCGGCCCAGGAGACGCGCAGCTGGGATTTCGATCCCTCGGTTCGCATCGACCATGATGT
CCGCGACCAAAAGGGGAATATGATCGCAAAGGCCGGTCAGAAGGTGAACCCGCTCGATTTCGTCGGCATTCATCAGGATC
TTGTCTTTGTCGATGGGGACAATGCCGAGCAGCTGGACTGGGCCTGCGGCAAATATAGCGACGTGAAGGCGAAGATCATC
TTCGTGAAGGGATCGCCGATCGAGGCGATGTCGCAGCGCAAGCGGCGCTTCTATTTCGACCAGGAGGGCAAGCTCACCGG
TCGCTTCGGCATCGAGCACACGCCCGCCGTCGTCAGCCAGGCGGGCCGTGTGATGCGGGTCACCGAACATGCGCTCAAGG
GGAGGGCGGGCTGA

Upstream 100 bases:

>100_bases
ATTTTGTCGGGACGCCGCACAAGGACGGGTTCGACAGCCGCTATGCTGACATCGGCTTCGTCTGCGCGCGCCGGATTATC
GGTACCGGGAAGCCGCTACT

Downstream 100 bases:

>100_bases
TGCCCTTGTGGCTCGACCTCCTGCGCACGCCAATGGCCGCGCCCGAGACAAGTGACCTGCGCCGCATGCGCCGGACCTGG
CACGCGTTGTGCATCCTTCT

Product: Type-F conjugative transfer system protein TraW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MTRTILLAATTACLGGATLFLVGSASEARDYGTAGQAFPIIEPDLLATIEARLRHAEASGELARTNALFAKRVEAKVRRP
DPVAGISPAQETRSWDFDPSVRIDHDVRDQKGNMIAKAGQKVNPLDFVGIHQDLVFVDGDNAEQLDWACGKYSDVKAKII
FVKGSPIEAMSQRKRRFYFDQEGKLTGRFGIEHTPAVVSQAGRVMRVTEHALKGRAG

Sequences:

>Translated_217_residues
MTRTILLAATTACLGGATLFLVGSASEARDYGTAGQAFPIIEPDLLATIEARLRHAEASGELARTNALFAKRVEAKVRRP
DPVAGISPAQETRSWDFDPSVRIDHDVRDQKGNMIAKAGQKVNPLDFVGIHQDLVFVDGDNAEQLDWACGKYSDVKAKII
FVKGSPIEAMSQRKRRFYFDQEGKLTGRFGIEHTPAVVSQAGRVMRVTEHALKGRAG
>Mature_216_residues
TRTILLAATTACLGGATLFLVGSASEARDYGTAGQAFPIIEPDLLATIEARLRHAEASGELARTNALFAKRVEAKVRRPD
PVAGISPAQETRSWDFDPSVRIDHDVRDQKGNMIAKAGQKVNPLDFVGIHQDLVFVDGDNAEQLDWACGKYSDVKAKIIF
VKGSPIEAMSQRKRRFYFDQEGKLTGRFGIEHTPAVVSQAGRVMRVTEHALKGRAG

Specific function: Involved in F-pilus assembly. Required for F plasmid conjugative transfer [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014114 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23677; Mature: 23546

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTILLAATTACLGGATLFLVGSASEARDYGTAGQAFPIIEPDLLATIEARLRHAEASG
CCEEEEEEEHHHHHCCEEEEEEECCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
ELARTNALFAKRVEAKVRRPDPVAGISPAQETRSWDFDPSVRIDHDVRDQKGNMIAKAGQ
CHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCEEECCCCCCCCCCEEECCCC
KVNPLDFVGIHQDLVFVDGDNAEQLDWACGKYSDVKAKIIFVKGSPIEAMSQRKRRFYFD
CCCCEEEEEECCEEEEEECCCCCHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCC
QEGKLTGRFGIEHTPAVVSQAGRVMRVTEHALKGRAG
CCCCEEEECCCCCCHHHHHHCCCEEHHHHHHHCCCCC
>Mature Secondary Structure 
TRTILLAATTACLGGATLFLVGSASEARDYGTAGQAFPIIEPDLLATIEARLRHAEASG
CEEEEEEEHHHHHCCEEEEEEECCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
ELARTNALFAKRVEAKVRRPDPVAGISPAQETRSWDFDPSVRIDHDVRDQKGNMIAKAGQ
CHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCEEECCCCCCCCCCEEECCCC
KVNPLDFVGIHQDLVFVDGDNAEQLDWACGKYSDVKAKIIFVKGSPIEAMSQRKRRFYFD
CCCCEEEEEECCEEEEEECCCCCHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCC
QEGKLTGRFGIEHTPAVVSQAGRVMRVTEHALKGRAG
CCCCEEEECCCCCCHHHHHHCCCEEHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1355084; 7915817; 2198250 [H]