Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

Click here to switch to the map view.

The map label for this gene is dsbC [C]

Identifier: 148550805

GI number: 148550805

Start: 275546

End: 276427

Strand: Direct

Name: dsbC [C]

Synonym: Swit_5369

Alternate gene names: 148550805

Gene position: 275546-276427 (Clockwise)

Preceding gene: 148550804

Following gene: 148550806

Centisome position: 88.82

GC content: 67.69

Gene sequence:

>882_bases
ATGTCCGTAACTGATCGCCTTCGCGCCGCTGCTGGGCGCACGCCCTGGAGCTTTGGCCTCATTGCCCTGCCGGTGGTGGG
ACTGGGCGCTGCAGCCATCGCTGCCGCCGCCGTGCCGACCGAAGACAGCCAGGTCGCCGGCCTGCTCAAGGCCCGGCTAC
CCAAGACCGAGATCAGCGCGGTCAACTGCGCCAAGGTCGCAGGGCTGTGCGAAGTGACGGCCGGCGCCAATCTCTTCTAT
GTCGATCGCGGCGCCCGCTATCTGGTCATCGGCCGGGTCTACGACATGGAAACGCGGCAGGACGTGACGGCCGCACGCCT
CCTGGAGATGAACCCCGACATGCTGGTCGGCGGCGCGGCCAAGGCCAATGCGACGGCCGCGCTCGGCGGCGAGGCGGACG
CTTCTCCCGTCGCACCGACAGCCGGCGCGCGCCGTGTCTCCGTGCCAGTGCGCCCGGCCACGCTGTCGCTCGCTGGGCTG
CCGCGCGACGGAGCGATCGTCTGGGGCAACAAGGCATCGAGCCAGTCGGTCACGGTCTTTACCGATTTTCGCTGCGGCTA
CTGCCGCGCGCTTACCAGCGTGCTGCGCAGCATGGACGTCAAGGTCATCGAACGGCCCATTTCGGTCCTGGGCAGCCGGG
ATCTGGCCGACCGCGTCTATTGCGCCAAGAACCGGGAAGAGGCGCTTCACGCCGCCTATTCCGGTGCGCCGTTCGAAAGC
GGCGGCAAATGTGACACGCGCGGTCTCGACGCCAACGAGCAATTTGCCCGTAGCCATGGCCTGAGCGGAACCCCCGTGAT
CGTTCGCAGCGACGGCGCCATGCTTGAGGGCTACCGGCCCAAGGATGTGCTGGAAGCATGGCTGAAGGGAGCCAAGTCGT
GA

Upstream 100 bases:

>100_bases
ATGGTCTCGAAATATCTGATCGAGCGCGCCGAACAGTATCAGCCGGTGATCGAGATGCCGACCGGCATCGATGTCGAAAT
CGTCTTCTTGGAGGGTGTCT

Downstream 100 bases:

>100_bases
AGGGCCGCGCCACGCACTGGCATGCTGGCCTGGCGCTCGCCGTCCTGCCGCTTATGGGGGGCTGCGCATCGTTCGGCAGC
AATATCGCGGGCAGTTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Periplasmic ThiolDisulfide Interchange Protein; ThiolDisulfide Interchange Protein DsbC; Thiol-Disulfide Interchange Protein DsbC; Disulfide Bond Isomerase Periplasmic; Chitinase; Protein-Disulfide Isomerase; ThiolDisulfide Interchange Protein; Disulfide Isomerase; Disulfide Bond Isomerase DsbC/G-Like Protein

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MSVTDRLRAAAGRTPWSFGLIALPVVGLGAAAIAAAAVPTEDSQVAGLLKARLPKTEISAVNCAKVAGLCEVTAGANLFY
VDRGARYLVIGRVYDMETRQDVTAARLLEMNPDMLVGGAAKANATAALGGEADASPVAPTAGARRVSVPVRPATLSLAGL
PRDGAIVWGNKASSQSVTVFTDFRCGYCRALTSVLRSMDVKVIERPISVLGSRDLADRVYCAKNREEALHAAYSGAPFES
GGKCDTRGLDANEQFARSHGLSGTPVIVRSDGAMLEGYRPKDVLEAWLKGAKS

Sequences:

>Translated_293_residues
MSVTDRLRAAAGRTPWSFGLIALPVVGLGAAAIAAAAVPTEDSQVAGLLKARLPKTEISAVNCAKVAGLCEVTAGANLFY
VDRGARYLVIGRVYDMETRQDVTAARLLEMNPDMLVGGAAKANATAALGGEADASPVAPTAGARRVSVPVRPATLSLAGL
PRDGAIVWGNKASSQSVTVFTDFRCGYCRALTSVLRSMDVKVIERPISVLGSRDLADRVYCAKNREEALHAAYSGAPFES
GGKCDTRGLDANEQFARSHGLSGTPVIVRSDGAMLEGYRPKDVLEAWLKGAKS
>Mature_292_residues
SVTDRLRAAAGRTPWSFGLIALPVVGLGAAAIAAAAVPTEDSQVAGLLKARLPKTEISAVNCAKVAGLCEVTAGANLFYV
DRGARYLVIGRVYDMETRQDVTAARLLEMNPDMLVGGAAKANATAALGGEADASPVAPTAGARRVSVPVRPATLSLAGLP
RDGAIVWGNKASSQSVTVFTDFRCGYCRALTSVLRSMDVKVIERPISVLGSRDLADRVYCAKNREEALHAAYSGAPFESG
GKCDTRGLDANEQFARSHGLSGTPVIVRSDGAMLEGYRPKDVLEAWLKGAKS

Specific function: Required For Disulfide Bond Formation In Some Periplasmic Proteins. Acts By Transferring Its Disulfide Bond To Other Proteins And Is Reduced In The Process. Dsbc Is Reoxidized By A Yet Uncharacterized Protein. Also Acts As A Disulfide Isomerase. [C]

COG id: COG1651

COG function: function code O; Protein-disulfide isomerase

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.3.4.1

Molecular weight: Translated: 30635; Mature: 30504

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTDRLRAAAGRTPWSFGLIALPVVGLGAAAIAAAAVPTEDSQVAGLLKARLPKTEISA
CCHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHH
VNCAKVAGLCEVTAGANLFYVDRGARYLVIGRVYDMETRQDVTAARLLEMNPDMLVGGAA
HHHHHHHHHEEECCCCEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHCCCCEEECCCC
KANATAALGGEADASPVAPTAGARRVSVPVRPATLSLAGLPRDGAIVWGNKASSQSVTVF
CCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCEEEECCCCCCCEEEEE
TDFRCGYCRALTSVLRSMDVKVIERPISVLGSRDLADRVYCAKNREEALHAAYSGAPFES
ECCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCCCC
GGKCDTRGLDANEQFARSHGLSGTPVIVRSDGAMLEGYRPKDVLEAWLKGAKS
CCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCEECCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
SVTDRLRAAAGRTPWSFGLIALPVVGLGAAAIAAAAVPTEDSQVAGLLKARLPKTEISA
CHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHH
VNCAKVAGLCEVTAGANLFYVDRGARYLVIGRVYDMETRQDVTAARLLEMNPDMLVGGAA
HHHHHHHHHEEECCCCEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHCCCCEEECCCC
KANATAALGGEADASPVAPTAGARRVSVPVRPATLSLAGLPRDGAIVWGNKASSQSVTVF
CCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCEEEECCCCCCCEEEEE
TDFRCGYCRALTSVLRSMDVKVIERPISVLGSRDLADRVYCAKNREEALHAAYSGAPFES
ECCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCCCC
GGKCDTRGLDANEQFARSHGLSGTPVIVRSDGAMLEGYRPKDVLEAWLKGAKS
CCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCEECCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA