Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

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The map label for this gene is 148550796

Identifier: 148550796

GI number: 148550796

Start: 268207

End: 269502

Strand: Reverse

Name: 148550796

Synonym: Swit_5360

Alternate gene names: NA

Gene position: 269502-268207 (Counterclockwise)

Preceding gene: 148550798

Following gene: 148550794

Centisome position: 86.87

GC content: 66.13

Gene sequence:

>1296_bases
ATGTGGCTGATCGACCGACAGGGCGACGGACAAAAAGGTCGTCGCATCCCCCTTCCCGACCTCGTGCGGTCCGCACTGGT
GCGCTGGTATATGGGCGAAGGCTCGCGCGGCGATGAAGAGGCGGGGATCGCGCTTGTCCAGCAAGCCCGGATCGGCGCCA
AGTGGATCGCATGCGACTGCCTGGGTCCCGACACCCGGCCGCCGGTCCTGACCCCTGCCTTTCTGTCGGAAGCTGAAACC
TATTATCTGCGGCGGCTGACGGGCGCCGACCGGCCCGAGCATCGTCCCCAATGCCCCTTCTTCCGCGAGCAGGCGACCAA
TCGCTTTTCGGAGATCCGCACGCCCCATTCGCCGGCCGATCCTCCGGAAGGCTATTTCGAAGTGCTGCGGCCAGCCCCTG
AGAAGCTCGCGCAAAAGCCGCAGGCCGACAGTATCGACGACAGGACGCGCAATGCGACGGTGCCGCGTCTCGCCCGCCTT
CTCTGGCGTCTTATGACCCTGGCCGGTGTCCATCGCACGCCGCCGGTTGGAGCGGAGCCGCCCGAACGCTCCATTGCGCA
AGAATTCAGGGCCCTGAGCGCGGCGGCCGCGCGGATCGAGCTTGCACCCGGCATCGAGCTCGGCCGCGCCTTATGGACAC
ACGCCCGTCCCTTTCACAACAATCGCGTGTTCGCAGGCCTGCGCGCGCTATCCCATCAGTGGCCACCGGGTCACGCGCCG
CAGGCCTTCCTCGCGCTCTACGCAACAGCGGTGCAGGGTGCGACCATCCATGTCGCGGGCGCCGAGCCACTGATGCTCGC
CAATCGGGTGCAGTCACCATCAATCCGCGGCAACCCGATCAAAGGTCCTTACCTGGTGCTGGTCGTGGTCGGCGAATATC
CCGAGGCCGACGGTTATGCGGCGCTGCGGGCCTATGCGCAGCCCATCGTCTCGGGCCGGCGTTTCGTGCCGGTTGCCTCC
GAATTCGAGCGTTCTCTCTTTCGCGGCCTGCTCGACGCGCGATGCGCGCTCGATCGCCTCGGCATAGACCTGGTGATCGA
AAAGCCGCTCTTCGACCAGTTGACCCCGCAAGGCCCCTGTCGGCCCGACTTCCTGCTTGAAGCGCAGTCGAGGGAGACCG
GCGAAATCCGGCAGCTGGTCGTTGCGGCGCAGAGCGCGCTCGACGAGGACCATCTGGCAGTGAAAGCCGCCATCTATCCG
CGCCTCGAGATGATCGCGCCGCTCATTACTCTCGGGCCCGATGCGCTCGAGCGGGGTGCCATACCGGATATCGTACGAAC
CGCCCTAGGCGTATGA

Upstream 100 bases:

>100_bases
GAAACCTGTCCTTGCCCGAGTGGAGGTGAACCCAAATCCCGTTGTCAATCCCTCGGCGCCTGGTCAGACTTTGCCCATTG
CGCTCCAGAAGGGCTCCTCC

Downstream 100 bases:

>100_bases
GACGGGCGCATCAGGTAATAGTGATCCGGTGAGCGCCCCGCCCCTGCTCAGGACCAGCGGAGCGTCGCGGCAAACCATGC
CACGATGCCCAAGGTGACCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MWLIDRQGDGQKGRRIPLPDLVRSALVRWYMGEGSRGDEEAGIALVQQARIGAKWIACDCLGPDTRPPVLTPAFLSEAET
YYLRRLTGADRPEHRPQCPFFREQATNRFSEIRTPHSPADPPEGYFEVLRPAPEKLAQKPQADSIDDRTRNATVPRLARL
LWRLMTLAGVHRTPPVGAEPPERSIAQEFRALSAAAARIELAPGIELGRALWTHARPFHNNRVFAGLRALSHQWPPGHAP
QAFLALYATAVQGATIHVAGAEPLMLANRVQSPSIRGNPIKGPYLVLVVVGEYPEADGYAALRAYAQPIVSGRRFVPVAS
EFERSLFRGLLDARCALDRLGIDLVIEKPLFDQLTPQGPCRPDFLLEAQSRETGEIRQLVVAAQSALDEDHLAVKAAIYP
RLEMIAPLITLGPDALERGAIPDIVRTALGV

Sequences:

>Translated_431_residues
MWLIDRQGDGQKGRRIPLPDLVRSALVRWYMGEGSRGDEEAGIALVQQARIGAKWIACDCLGPDTRPPVLTPAFLSEAET
YYLRRLTGADRPEHRPQCPFFREQATNRFSEIRTPHSPADPPEGYFEVLRPAPEKLAQKPQADSIDDRTRNATVPRLARL
LWRLMTLAGVHRTPPVGAEPPERSIAQEFRALSAAAARIELAPGIELGRALWTHARPFHNNRVFAGLRALSHQWPPGHAP
QAFLALYATAVQGATIHVAGAEPLMLANRVQSPSIRGNPIKGPYLVLVVVGEYPEADGYAALRAYAQPIVSGRRFVPVAS
EFERSLFRGLLDARCALDRLGIDLVIEKPLFDQLTPQGPCRPDFLLEAQSRETGEIRQLVVAAQSALDEDHLAVKAAIYP
RLEMIAPLITLGPDALERGAIPDIVRTALGV
>Mature_431_residues
MWLIDRQGDGQKGRRIPLPDLVRSALVRWYMGEGSRGDEEAGIALVQQARIGAKWIACDCLGPDTRPPVLTPAFLSEAET
YYLRRLTGADRPEHRPQCPFFREQATNRFSEIRTPHSPADPPEGYFEVLRPAPEKLAQKPQADSIDDRTRNATVPRLARL
LWRLMTLAGVHRTPPVGAEPPERSIAQEFRALSAAAARIELAPGIELGRALWTHARPFHNNRVFAGLRALSHQWPPGHAP
QAFLALYATAVQGATIHVAGAEPLMLANRVQSPSIRGNPIKGPYLVLVVVGEYPEADGYAALRAYAQPIVSGRRFVPVAS
EFERSLFRGLLDARCALDRLGIDLVIEKPLFDQLTPQGPCRPDFLLEAQSRETGEIRQLVVAAQSALDEDHLAVKAAIYP
RLEMIAPLITLGPDALERGAIPDIVRTALGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47468; Mature: 47468

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLIDRQGDGQKGRRIPLPDLVRSALVRWYMGEGSRGDEEAGIALVQQARIGAKWIACDC
CCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEC
LGPDTRPPVLTPAFLSEAETYYLRRLTGADRPEHRPQCPFFREQATNRFSEIRTPHSPAD
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
PPEGYFEVLRPAPEKLAQKPQADSIDDRTRNATVPRLARLLWRLMTLAGVHRTPPVGAEP
CCHHHHHHHCCCHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
PERSIAQEFRALSAAAARIELAPGIELGRALWTHARPFHNNRVFAGLRALSHQWPPGHAP
CHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCH
QAFLALYATAVQGATIHVAGAEPLMLANRVQSPSIRGNPIKGPYLVLVVVGEYPEADGYA
HHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCHH
ALRAYAQPIVSGRRFVPVASEFERSLFRGLLDARCALDRLGIDLVIEKPLFDQLTPQGPC
HHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHCCCCCCC
RPDFLLEAQSRETGEIRQLVVAAQSALDEDHLAVKAAIYPRLEMIAPLITLGPDALERGA
CCCCEEECCCCCHHHHHHHHHHHHHHCCHHHHEEHHHHHHHHHHHHHHHHCCHHHHHHCC
IPDIVRTALGV
CHHHHHHHHCC
>Mature Secondary Structure
MWLIDRQGDGQKGRRIPLPDLVRSALVRWYMGEGSRGDEEAGIALVQQARIGAKWIACDC
CCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEC
LGPDTRPPVLTPAFLSEAETYYLRRLTGADRPEHRPQCPFFREQATNRFSEIRTPHSPAD
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
PPEGYFEVLRPAPEKLAQKPQADSIDDRTRNATVPRLARLLWRLMTLAGVHRTPPVGAEP
CCHHHHHHHCCCHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
PERSIAQEFRALSAAAARIELAPGIELGRALWTHARPFHNNRVFAGLRALSHQWPPGHAP
CHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCH
QAFLALYATAVQGATIHVAGAEPLMLANRVQSPSIRGNPIKGPYLVLVVVGEYPEADGYA
HHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCHH
ALRAYAQPIVSGRRFVPVASEFERSLFRGLLDARCALDRLGIDLVIEKPLFDQLTPQGPC
HHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHCCCCCCC
RPDFLLEAQSRETGEIRQLVVAAQSALDEDHLAVKAAIYPRLEMIAPLITLGPDALERGA
CCCCEEECCCCCHHHHHHHHHHHHHHCCHHHHEEHHHHHHHHHHHHHHHHCCHHHHHHCC
IPDIVRTALGV
CHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA