Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550783
Identifier: 148550783
GI number: 148550783
Start: 255321
End: 255743
Strand: Reverse
Name: 148550783
Synonym: Swit_5347
Alternate gene names: NA
Gene position: 255743-255321 (Counterclockwise)
Preceding gene: 148550785
Following gene: 148550782
Centisome position: 82.44
GC content: 64.54
Gene sequence:
>423_bases ATGAGCATCTTCGGCAACATTCTAGGCAAGATCTTCCACCCGAACGCGGCCAAGGCCGCGCCCGCGAGTCCTGCGCCCTC CGCCGCGCCTGCCGCGCCAAGTCCCGCCCCAGCGCCCACGACCCCTGCTCCGGCCCCCGCCGCCGCTGCACCGGCGCAAA CATCGGTCGACGTCGGGCCCGTCCTGGAGGCTATGGCCGCTATGAAGGACGATCATGGCGGCAACTACAAGACGTCGATC GTCGATCTCCTGAAGCTTCTCGATCTCGATTCCAGTCTCACCGCCCGAAAGGAGCTGGCCGAGGAACTCGGGGTGAATGC CGGCGAACCCGGTTCAGCCGAACAGAATATCGCGCTTCACCGCGCCGTCATGGACAAGCTTGCCGAAAATGGCGGCATTG TTCCCGACGACATGCGCAATTAG
Upstream 100 bases:
>100_bases CGGACCAGGCTTCATCGTTCCAGCGGCGGACCTTTTCGAACGCGGGACGTTTCACCCCTGCCCGCCTGCCGCGCGGCATG AGACCCAAGGAGACGAGACG
Downstream 100 bases:
>100_bases GCGGTTGCGCATCGCGGCTGTTCCAACGGAGCAGCCGCATTGCCGCAACGACGATCCAGCGAGTGACGACGGCTGCAAAG GCGTGCAGGCCGGGCAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MSIFGNILGKIFHPNAAKAAPASPAPSAAPAAPSPAPAPTTPAPAPAAAAPAQTSVDVGPVLEAMAAMKDDHGGNYKTSI VDLLKLLDLDSSLTARKELAEELGVNAGEPGSAEQNIALHRAVMDKLAENGGIVPDDMRN
Sequences:
>Translated_140_residues MSIFGNILGKIFHPNAAKAAPASPAPSAAPAAPSPAPAPTTPAPAPAAAAPAQTSVDVGPVLEAMAAMKDDHGGNYKTSI VDLLKLLDLDSSLTARKELAEELGVNAGEPGSAEQNIALHRAVMDKLAENGGIVPDDMRN >Mature_139_residues SIFGNILGKIFHPNAAKAAPASPAPSAAPAAPSPAPAPTTPAPAPAAAAPAQTSVDVGPVLEAMAAMKDDHGGNYKTSIV DLLKLLDLDSSLTARKELAEELGVNAGEPGSAEQNIALHRAVMDKLAENGGIVPDDMRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14109; Mature: 13978
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFGNILGKIFHPNAAKAAPASPAPSAAPAAPSPAPAPTTPAPAPAAAAPAQTSVDVGP CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH VLEAMAAMKDDHGGNYKTSIVDLLKLLDLDSSLTARKELAEELGVNAGEPGSAEQNIALH HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHH RAVMDKLAENGGIVPDDMRN HHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SIFGNILGKIFHPNAAKAAPASPAPSAAPAAPSPAPAPTTPAPAPAAAAPAQTSVDVGP CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH VLEAMAAMKDDHGGNYKTSIVDLLKLLDLDSSLTARKELAEELGVNAGEPGSAEQNIALH HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHH RAVMDKLAENGGIVPDDMRN HHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA