Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550699
Identifier: 148550699
GI number: 148550699
Start: 153529
End: 153852
Strand: Direct
Name: 148550699
Synonym: Swit_5263
Alternate gene names: NA
Gene position: 153529-153852 (Clockwise)
Preceding gene: 148550692
Following gene: 148550700
Centisome position: 49.49
GC content: 66.05
Gene sequence:
>324_bases ATGTGTGTTCACATGTTGCGAGGTCCGGCGGCTCCCGCGTCCAGTGCGCGGGAGTTCGGACGACATGCCAATCGCCCCCT CTCCCACGGTTCAACCGGGAGCTCGAGGATGATGGGCATGGCAGACACGAACAGCCGGGGCATCGCGATAGGCCTCATGC GGCAGGCGATGATGTTTCTGGAAAAGGCCGAAGACTGGGATACGGCGGCGCGGCTGCAGCATGCGCTCGATGTGGCGCTC GCGGCCCGGCCCCTCCAGCCCGGCGAAGAGCTCGATCCGCAGAGCGCCGCGCTCATCGCGGGTATTCCGCTCAGCAGCGA TTAG
Upstream 100 bases:
>100_bases GCCGGACCTCGCAAGTCCGTGAACACAAGCAACTCGAAAACCATCGGTTTCCGGGCTGCCGTCGCGCATGTCCAGACCTT CGGGTTAAAGGTGGCGGCGC
Downstream 100 bases:
>100_bases GGCATTCGCCGGGCCTCGAGGGATTGGAAACCCTGCACCTCTTCCCTAGGAGGATTGCGGGAATTGGCAGGGCATCGCGT TGAGAAGAAACCGGATCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MCVHMLRGPAAPASSAREFGRHANRPLSHGSTGSSRMMGMADTNSRGIAIGLMRQAMMFLEKAEDWDTAARLQHALDVAL AARPLQPGEELDPQSAALIAGIPLSSD
Sequences:
>Translated_107_residues MCVHMLRGPAAPASSAREFGRHANRPLSHGSTGSSRMMGMADTNSRGIAIGLMRQAMMFLEKAEDWDTAARLQHALDVAL AARPLQPGEELDPQSAALIAGIPLSSD >Mature_107_residues MCVHMLRGPAAPASSAREFGRHANRPLSHGSTGSSRMMGMADTNSRGIAIGLMRQAMMFLEKAEDWDTAARLQHALDVAL AARPLQPGEELDPQSAALIAGIPLSSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11353; Mature: 11353
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 7.5 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCVHMLRGPAAPASSAREFGRHANRPLSHGSTGSSRMMGMADTNSRGIAIGLMRQAMMFL CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHH EKAEDWDTAARLQHALDVALAARPLQPGEELDPQSAALIAGIPLSSD HHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCC >Mature Secondary Structure MCVHMLRGPAAPASSAREFGRHANRPLSHGSTGSSRMMGMADTNSRGIAIGLMRQAMMFL CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHH EKAEDWDTAARLQHALDVALAARPLQPGEELDPQSAALIAGIPLSSD HHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA