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The map label for this gene is 148550654

Identifier: 148550654

GI number: 148550654

Start: 108234

End: 108599

Strand: Reverse

Name: 148550654

Synonym: Swit_5217

Alternate gene names: NA

Gene position: 108599-108234 (Counterclockwise)

Preceding gene: 148550655

Following gene: 148550653

Centisome position: 35.01

GC content: 65.57

Gene sequence:

>366_bases
ATGATATGTCATGCACTTTCCATGCCCCGCGCCTCTCGAGCCTCCAGCGGTCTGCCGCCACAAAGCCAGCGTGCCATTCG
CCAGTTGGGCGAAGACTTGCGCACCGCACGCAAGCGGCGACGCATCCCGCAGAAACTGATGGCCGAGCGTATGCTGGTGT
CGGTGCAGACGCTGCAGCGTCTCGAAGCCGGCGATCCGACCGTAGGCCTCGCCGCGCTGGCGAGCGCTCTCTTCGTGCTG
GGTATGACGGCTCGCCTGGAATCGCTCGTCGCCCCTGAAACCGACAGGGTCGGGACCAGCGAGGAAATCGGCCGCCTGCC
GCACAGCATCCACACGCCGCGGCGCGACGATCCGCTGGATTTCTAA

Upstream 100 bases:

>100_bases
ACCGATGCGGCTGCGCGCGCGTTGCGCGCCTGAGCAGGACGGCAGGGCAGGAAAACCGTTCTGTTCGGCATGACATATCA
TTTTAATTGCTCATTTGCAC

Downstream 100 bases:

>100_bases
GCCATGGCCGACATCGAAACCTTCGTTTTCGTCTATTTGGACGGCGTTGCCGTCCCTGCGGGCCTTTTGCGCCTCCACAG
CGAGCCGCGTGCCAGCTACG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MICHALSMPRASRASSGLPPQSQRAIRQLGEDLRTARKRRRIPQKLMAERMLVSVQTLQRLEAGDPTVGLAALASALFVL
GMTARLESLVAPETDRVGTSEEIGRLPHSIHTPRRDDPLDF

Sequences:

>Translated_121_residues
MICHALSMPRASRASSGLPPQSQRAIRQLGEDLRTARKRRRIPQKLMAERMLVSVQTLQRLEAGDPTVGLAALASALFVL
GMTARLESLVAPETDRVGTSEEIGRLPHSIHTPRRDDPLDF
>Mature_121_residues
MICHALSMPRASRASSGLPPQSQRAIRQLGEDLRTARKRRRIPQKLMAERMLVSVQTLQRLEAGDPTVGLAALASALFVL
GMTARLESLVAPETDRVGTSEEIGRLPHSIHTPRRDDPLDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13349; Mature: 13349

Theoretical pI: Translated: 11.47; Mature: 11.47

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICHALSMPRASRASSGLPPQSQRAIRQLGEDLRTARKRRRIPQKLMAERMLVSVQTLQR
CCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LEAGDPTVGLAALASALFVLGMTARLESLVAPETDRVGTSEEIGRLPHSIHTPRRDDPLD
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHCCCCCCCCCC
F
C
>Mature Secondary Structure
MICHALSMPRASRASSGLPPQSQRAIRQLGEDLRTARKRRRIPQKLMAERMLVSVQTLQR
CCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LEAGDPTVGLAALASALFVLGMTARLESLVAPETDRVGTSEEIGRLPHSIHTPRRDDPLD
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHCCCCCCCCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA