Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

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The map label for this gene is 148550647

Identifier: 148550647

GI number: 148550647

Start: 98261

End: 99064

Strand: Reverse

Name: 148550647

Synonym: Swit_5209

Alternate gene names: NA

Gene position: 99064-98261 (Counterclockwise)

Preceding gene: 148550653

Following gene: 148550644

Centisome position: 31.93

GC content: 60.07

Gene sequence:

>804_bases
ATGCCGCCGCAGGATCGACACATCAGGAACGTCCTGAAACTCTTCGATGCGCATTGCTATCGTCACGACCGCTACACGCT
CTTCTCCGACTGCATGGAGCTCATAGCGATCAGCATCTCGAACAGCGTCGACAGCCGATCCCGGGAAACGCGCGAGGCGC
GCTATCTCGAGATCGTGGGACGATATGAGCAGCACACCATCGAGATGTTCCCTCGCGTCTTCGGAGAGATCACAATGGCA
CTGGAGGAAGCGCCAGGGGACGTCCTCGGGAGCATCTTCACCGCGCTCGAGATCCACAACAAGAACCGTGGGCAATTCTT
CACGCCCTATCCGGTTTGCCAGATGATGGCACAGGTCACGCTTGGCGATGCCAAGGACGCCCTGGCGCTGATCGACGACA
AGGGTTTCGTCAGCGCGATGGAACCCGCCTGCGGTGCCGGCGCCATGGTCATTGCTCTCGCCGAAGCGATGCGCGCCGCC
GGGATCAACTATCAGCGCCATCTCCACGTGACGGCGATCGATATCGACCAACGCGCCGTACACATGGGCTATATCCAGTT
CTCGCTGCTCCACATTCCGGCCCACGTGATCGTTGGTAACTCTCTCAGCAACGAGGTCCGCGAACACTGGTTCACGCCGG
CCCACATCCTCGGCGGCTGGGGCGCCAGGCTTGCCAGCCAGGAACGCTTGGTCGAACAACCCCCGCGATTTTTTACTGAA
ACGACACCGGAACGCACAACCCACGATAAGCAAGCCCAAGAGCCAAGGACCAGAACGGTCGGCGAGCAGTTGACCCTATT
CTGA

Upstream 100 bases:

>100_bases
CCCGGGCTCGGGCGCCGAGCCATTCGCCCGAGCCCTTCCACGCCCGCCAATCAGAACGTCGCGATGCCGCGCGAAGCGGC
CCCGTGACCGGGGATCTCTC

Downstream 100 bases:

>100_bases
ATTGCAATCCCGCCAGCGCGCCTCGGCTCTGGACATCACACTCTGAGGCGGGCTCTGGATCACCAATATACCCGGAACCT
CCGGTCAGAGCGATCATAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MPPQDRHIRNVLKLFDAHCYRHDRYTLFSDCMELIAISISNSVDSRSRETREARYLEIVGRYEQHTIEMFPRVFGEITMA
LEEAPGDVLGSIFTALEIHNKNRGQFFTPYPVCQMMAQVTLGDAKDALALIDDKGFVSAMEPACGAGAMVIALAEAMRAA
GINYQRHLHVTAIDIDQRAVHMGYIQFSLLHIPAHVIVGNSLSNEVREHWFTPAHILGGWGARLASQERLVEQPPRFFTE
TTPERTTHDKQAQEPRTRTVGEQLTLF

Sequences:

>Translated_267_residues
MPPQDRHIRNVLKLFDAHCYRHDRYTLFSDCMELIAISISNSVDSRSRETREARYLEIVGRYEQHTIEMFPRVFGEITMA
LEEAPGDVLGSIFTALEIHNKNRGQFFTPYPVCQMMAQVTLGDAKDALALIDDKGFVSAMEPACGAGAMVIALAEAMRAA
GINYQRHLHVTAIDIDQRAVHMGYIQFSLLHIPAHVIVGNSLSNEVREHWFTPAHILGGWGARLASQERLVEQPPRFFTE
TTPERTTHDKQAQEPRTRTVGEQLTLF
>Mature_266_residues
PPQDRHIRNVLKLFDAHCYRHDRYTLFSDCMELIAISISNSVDSRSRETREARYLEIVGRYEQHTIEMFPRVFGEITMAL
EEAPGDVLGSIFTALEIHNKNRGQFFTPYPVCQMMAQVTLGDAKDALALIDDKGFVSAMEPACGAGAMVIALAEAMRAAG
INYQRHLHVTAIDIDQRAVHMGYIQFSLLHIPAHVIVGNSLSNEVREHWFTPAHILGGWGARLASQERLVEQPPRFFTET
TPERTTHDKQAQEPRTRTVGEQLTLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30204; Mature: 30073

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPQDRHIRNVLKLFDAHCYRHDRYTLFSDCMELIAISISNSVDSRSRETREARYLEIVG
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RYEQHTIEMFPRVFGEITMALEEAPGDVLGSIFTALEIHNKNRGQFFTPYPVCQMMAQVT
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHH
LGDAKDALALIDDKGFVSAMEPACGAGAMVIALAEAMRAAGINYQRHLHVTAIDIDQRAV
CCCCHHHHEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHH
HMGYIQFSLLHIPAHVIVGNSLSNEVREHWFTPAHILGGWGARLASQERLVEQPPRFFTE
HHHHHHHHHHHHCHHHEECCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHCCCHHHCC
TTPERTTHDKQAQEPRTRTVGEQLTLF
CCCCCCCCCHHHCCCHHHHHCCHHCCC
>Mature Secondary Structure 
PPQDRHIRNVLKLFDAHCYRHDRYTLFSDCMELIAISISNSVDSRSRETREARYLEIVG
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RYEQHTIEMFPRVFGEITMALEEAPGDVLGSIFTALEIHNKNRGQFFTPYPVCQMMAQVT
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHH
LGDAKDALALIDDKGFVSAMEPACGAGAMVIALAEAMRAAGINYQRHLHVTAIDIDQRAV
CCCCHHHHEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHH
HMGYIQFSLLHIPAHVIVGNSLSNEVREHWFTPAHILGGWGARLASQERLVEQPPRFFTE
HHHHHHHHHHHHCHHHEECCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHCCCHHHCC
TTPERTTHDKQAQEPRTRTVGEQLTLF
CCCCCCCCCHHHCCCHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA