Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550633
Identifier: 148550633
GI number: 148550633
Start: 82900
End: 83991
Strand: Reverse
Name: 148550633
Synonym: Swit_5194
Alternate gene names: NA
Gene position: 83991-82900 (Counterclockwise)
Preceding gene: 148550634
Following gene: 148550632
Centisome position: 27.07
GC content: 67.12
Gene sequence:
>1092_bases ATGGCAACACGAGCGAGTTCCCCCAGCCTTCCTGCAGCGCCCAGGCCAAGGCGCTTCACGCGCGGATCCTCCCCGATCCC GACAACGGCAAAGGCGAAGCGCCGGAGCCGCTCCAGCCTCCTCCCGGTCTCAGGCTCGCGCCCCTCGGTTGACCTCGCGG GGCGAACGGTCGCGTTATCGGCCGACATTCCCGCGACCTTCGACCAGCCCCTCAGCAATCACCACAAGCTGATCGGCCGC TGGGTCGCGGGGCGAGAGCCGAGCGCCAAGCAATACACCCGTGTGAGTGCCCGCCGCCGCATCGAGCAGGTTTTCAACGC TGCCGTGCTCGAGATCCTGGACCCGATCGAAATCGTCGACCTGCGGATCGCGGTCCTCACCGGCGAAGACGCCAACCCGC CGGCGATCGCGGTCGCGTGTGACAGCCTCGGACAGCTGGATCTCGGCTGGATCGAAACCGGCGAGGCGCCCACCCCCTGG CGTGCCGCGGCCTATGCGGCGCTCGGCGAAACCCTCGGCACCGCGCTCCCGATCTTCGGCTACCAGGACCTCTTCGACGA AATCTCCATGTATTACTGGGACGGGGAGATCGACGACGAGGGCGCGCGCCAGAGCCTGATCGCCTATCACGGCCTCAGCG CCGAGGAACTCGAAGAGCAGACCATGCCTTCGGAGATGAACGCGCGCCGGCCTGACTGGATGATCGGCGCGAACGCGGCG AAACCGGCCGCCCTTCCGAAGGGCCTGCGCGAGGCGCTCTGCCAGCTTCGCGACGCGCACAAGGCGCTCAAGCGGCTGCC ATCGGACCGCAACGCCTGGCACTTCGATACCGACATTCTCTACGAATATGTGCCGGGGATCGAGGAATGCTCGTCCCTGC CGCCGTTGACGCTCGTGCCTTTCGATGAGTTCGCGCGCGAGCTCGACGATGTCGCCCGCCACGGCATGGAAATGGGCTTC ATGGACGTCTGCGGCATCTGCCCGCTGCCCGATGTCAGCCGGATCGACGACTGGTTCGCAAGCCTGCGCCTCGGCGTCCA GTTCCTGCTCGCCGCCCAGGACCTCGTCCGCTTCGACCCACCCAATCCGTGA
Upstream 100 bases:
>100_bases CCGCGCCGTCGGCACCAAGGGCTGATCGTGCCCTGCGGCAACGACGCGCCGATCCCCGCCGCACCGCGCAAGACGCTCCT CGAATGGATCGAGCACGACG
Downstream 100 bases:
>100_bases GGCCGTCATGTCCGATCACAGCAGCCACTTCGAAACCACTGGCGGCGGTCTCGTCCTGACCAACGCCGTTCTGCTCTATC AGGCGGGAACGCCCCGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MATRASSPSLPAAPRPRRFTRGSSPIPTTAKAKRRSRSSLLPVSGSRPSVDLAGRTVALSADIPATFDQPLSNHHKLIGR WVAGREPSAKQYTRVSARRRIEQVFNAAVLEILDPIEIVDLRIAVLTGEDANPPAIAVACDSLGQLDLGWIETGEAPTPW RAAAYAALGETLGTALPIFGYQDLFDEISMYYWDGEIDDEGARQSLIAYHGLSAEELEEQTMPSEMNARRPDWMIGANAA KPAALPKGLREALCQLRDAHKALKRLPSDRNAWHFDTDILYEYVPGIEECSSLPPLTLVPFDEFARELDDVARHGMEMGF MDVCGICPLPDVSRIDDWFASLRLGVQFLLAAQDLVRFDPPNP
Sequences:
>Translated_363_residues MATRASSPSLPAAPRPRRFTRGSSPIPTTAKAKRRSRSSLLPVSGSRPSVDLAGRTVALSADIPATFDQPLSNHHKLIGR WVAGREPSAKQYTRVSARRRIEQVFNAAVLEILDPIEIVDLRIAVLTGEDANPPAIAVACDSLGQLDLGWIETGEAPTPW RAAAYAALGETLGTALPIFGYQDLFDEISMYYWDGEIDDEGARQSLIAYHGLSAEELEEQTMPSEMNARRPDWMIGANAA KPAALPKGLREALCQLRDAHKALKRLPSDRNAWHFDTDILYEYVPGIEECSSLPPLTLVPFDEFARELDDVARHGMEMGF MDVCGICPLPDVSRIDDWFASLRLGVQFLLAAQDLVRFDPPNP >Mature_362_residues ATRASSPSLPAAPRPRRFTRGSSPIPTTAKAKRRSRSSLLPVSGSRPSVDLAGRTVALSADIPATFDQPLSNHHKLIGRW VAGREPSAKQYTRVSARRRIEQVFNAAVLEILDPIEIVDLRIAVLTGEDANPPAIAVACDSLGQLDLGWIETGEAPTPWR AAAYAALGETLGTALPIFGYQDLFDEISMYYWDGEIDDEGARQSLIAYHGLSAEELEEQTMPSEMNARRPDWMIGANAAK PAALPKGLREALCQLRDAHKALKRLPSDRNAWHFDTDILYEYVPGIEECSSLPPLTLVPFDEFARELDDVARHGMEMGFM DVCGICPLPDVSRIDDWFASLRLGVQFLLAAQDLVRFDPPNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39943; Mature: 39812
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRASSPSLPAAPRPRRFTRGSSPIPTTAKAKRRSRSSLLPVSGSRPSVDLAGRTVALS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEECCCEEEEE ADIPATFDQPLSNHHKLIGRWVAGREPSAKQYTRVSARRRIEQVFNAAVLEILDPIEIVD CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEE LRIAVLTGEDANPPAIAVACDSLGQLDLGWIETGEAPTPWRAAAYAALGETLGTALPIFG EEEEEEECCCCCCCEEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCC YQDLFDEISMYYWDGEIDDEGARQSLIAYHGLSAEELEEQTMPSEMNARRPDWMIGANAA HHHHHHHHHEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCHHCCCCCCEEEECCCC KPAALPKGLREALCQLRDAHKALKRLPSDRNAWHFDTDILYEYVPGIEECSSLPPLTLVP CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHCCCHHHHHCCCCEEECC FDEFARELDDVARHGMEMGFMDVCGICPLPDVSRIDDWFASLRLGVQFLLAAQDLVRFDP HHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PNP CCC >Mature Secondary Structure ATRASSPSLPAAPRPRRFTRGSSPIPTTAKAKRRSRSSLLPVSGSRPSVDLAGRTVALS CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEECCCEEEEE ADIPATFDQPLSNHHKLIGRWVAGREPSAKQYTRVSARRRIEQVFNAAVLEILDPIEIVD CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEE LRIAVLTGEDANPPAIAVACDSLGQLDLGWIETGEAPTPWRAAAYAALGETLGTALPIFG EEEEEEECCCCCCCEEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCC YQDLFDEISMYYWDGEIDDEGARQSLIAYHGLSAEELEEQTMPSEMNARRPDWMIGANAA HHHHHHHHHEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCHHCCCCCCEEEECCCC KPAALPKGLREALCQLRDAHKALKRLPSDRNAWHFDTDILYEYVPGIEECSSLPPLTLVP CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHCCCHHHHHCCCCEEECC FDEFARELDDVARHGMEMGFMDVCGICPLPDVSRIDDWFASLRLGVQFLLAAQDLVRFDP HHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PNP CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA