Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

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The map label for this gene is 148550604

Identifier: 148550604

GI number: 148550604

Start: 59709

End: 60398

Strand: Reverse

Name: 148550604

Synonym: Swit_5165

Alternate gene names: NA

Gene position: 60398-59709 (Counterclockwise)

Preceding gene: 148550605

Following gene: 148550602

Centisome position: 19.47

GC content: 67.54

Gene sequence:

>690_bases
GTGCGCGGGGGCATCGAACCCCCGCGCACCGCCGGGCGCTGGCGCGCGCCGCACGGACAATACCCGAAAGGGCCAAGGAA
AGAGGGGAGAGGCGAGGCGCTTTCAGCCGAGGAGACCAAGCCCGTGTCCATCCTGTTCCGCATCACCGAGCCGGCCGACG
ATACAGCCTCGCCCAGCGCCATCATCACAGCCCGCAAGCTTGCGGCTTTCCGCCGGTTCCTCCGTTCCGAAGGAGATCGT
ATCGGCATCGCGCTGCTCGAACCCGACGAATATCTTGGCGACAGCTTCGAGGCGCGCGTCTGTCCACTCGCGCTCGCCGC
GATCACGGGCATTTTCGACCACGAGGCCACTGTCATCGCAGTCGTCGAGGAGGCCCAGTTCAGAGGCAAGCGCATCGCGA
TCCATCACTGCCCGAGCAGCGCCGAGATCATCCTGCGCGTCGCCCTCACGTCCGATCAGGGCGTCGAACTCGATCTCGCC
TACGGCAATGCCTACGCGCTGCTCGAAGCGCTCGCGATCGAGCCTGACAGCGTCGGTGACATCCCCATCGATCTCCTACG
CGCCCGGCTGTCCGATCCGGCCACGCCGAGCCGCGCGGCGCTGCGCGGTGTCGGTCATTACCTGCCCCGACTAGAGCGTC
TCGTCGCGAGCGCGCAGGAGCGCGAGGCTGCCCGCTTCGCATGGGCCTGA

Upstream 100 bases:

>100_bases
CGCCATGGTGAACGGCGGTGGTCGCCGTCGTCGGTGACGCGTCCGGGAGAGGCTCCGGCAATCGCCGGGGCCTCTCCTGC
TTTTTCGCTGCGAGGATGCG

Downstream 100 bases:

>100_bases
CATGCGTTAGTCCCGGCAATTCTTCTCCGGCGGGATCCTGTCGGTCCTTCGACGCATGAGGCTGTCGATCGCCGCCTGTA
AATGACAGGTCGCCATCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MRGGIEPPRTAGRWRAPHGQYPKGPRKEGRGEALSAEETKPVSILFRITEPADDTASPSAIITARKLAAFRRFLRSEGDR
IGIALLEPDEYLGDSFEARVCPLALAAITGIFDHEATVIAVVEEAQFRGKRIAIHHCPSSAEIILRVALTSDQGVELDLA
YGNAYALLEALAIEPDSVGDIPIDLLRARLSDPATPSRAALRGVGHYLPRLERLVASAQEREAARFAWA

Sequences:

>Translated_229_residues
MRGGIEPPRTAGRWRAPHGQYPKGPRKEGRGEALSAEETKPVSILFRITEPADDTASPSAIITARKLAAFRRFLRSEGDR
IGIALLEPDEYLGDSFEARVCPLALAAITGIFDHEATVIAVVEEAQFRGKRIAIHHCPSSAEIILRVALTSDQGVELDLA
YGNAYALLEALAIEPDSVGDIPIDLLRARLSDPATPSRAALRGVGHYLPRLERLVASAQEREAARFAWA
>Mature_229_residues
MRGGIEPPRTAGRWRAPHGQYPKGPRKEGRGEALSAEETKPVSILFRITEPADDTASPSAIITARKLAAFRRFLRSEGDR
IGIALLEPDEYLGDSFEARVCPLALAAITGIFDHEATVIAVVEEAQFRGKRIAIHHCPSSAEIILRVALTSDQGVELDLA
YGNAYALLEALAIEPDSVGDIPIDLLRARLSDPATPSRAALRGVGHYLPRLERLVASAQEREAARFAWA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24882; Mature: 24882

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGGIEPPRTAGRWRAPHGQYPKGPRKEGRGEALSAEETKPVSILFRITEPADDTASPSA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHH
IITARKLAAFRRFLRSEGDRIGIALLEPDEYLGDSFEARVCPLALAAITGIFDHEATVIA
HHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEE
VVEEAQFRGKRIAIHHCPSSAEIILRVALTSDQGVELDLAYGNAYALLEALAIEPDSVGD
EEEHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCEEEEECCCHHHHHHHHHCCCCCCCC
IPIDLLRARLSDPATPSRAALRGVGHYLPRLERLVASAQEREAARFAWA
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRGGIEPPRTAGRWRAPHGQYPKGPRKEGRGEALSAEETKPVSILFRITEPADDTASPSA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHH
IITARKLAAFRRFLRSEGDRIGIALLEPDEYLGDSFEARVCPLALAAITGIFDHEATVIA
HHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEE
VVEEAQFRGKRIAIHHCPSSAEIILRVALTSDQGVELDLAYGNAYALLEALAIEPDSVGD
EEEHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCEEEEECCCHHHHHHHHHCCCCCCCC
IPIDLLRARLSDPATPSRAALRGVGHYLPRLERLVASAQEREAARFAWA
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA