Click here to switch to the map view.

The map label for this gene is 148550560

Identifier: 148550560

GI number: 148550560

Start: 5358

End: 5672

Strand: Direct

Name: 148550560

Synonym: Swit_5121

Alternate gene names: NA

Gene position: 5358-5672 (Clockwise)

Preceding gene: 148550559

Following gene: 148550563

Centisome position: 1.73

GC content: 65.08

Gene sequence:

>315_bases
ATGAGCCGGAAGGGATCATTGCTTGCATTGCGGGATCGCGATCCCGCACCAACGCCGGCGTCGACCGAGCCGGAGGGAAG
GGCGGCCGCGCTGACCGCCCGCAGCACTGGCGTAGGCACCGGCAGCAGTTCGAGCAGCAGCCCGGTTGCGCCGAGCCGTC
AGGGCAAGAAGGCGATGACGGGCTATTTCAGCCCGGAAATGTCGTTCGCCATGCACATGACCGCCCGCAAGCACGGCATG
AGCTTGCAGGACGCGATGGCCGAGGCGTTCAACGACTGGCTCCGAAAGATGGGGGAAAGTCCTGTAGGCAAGTGA

Upstream 100 bases:

>100_bases
TCGAGCCGGACGGCAAGGCGGCAGACGAGGTGCGCCAGCTTTACAAGTGGACATGCGAGCATGTAAACATGCAAGCATCA
ACGAAGCGGAGGGCCAGCGC

Downstream 100 bases:

>100_bases
GCATGTTCACATGCAAACATATAGCTTAGGGGAAAACTCATGCCGTGCTAATCGTGTCCGCCATCTTCGCACTGGTGATG
ATCGGATTGTCCATCCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MSRKGSLLALRDRDPAPTPASTEPEGRAAALTARSTGVGTGSSSSSSPVAPSRQGKKAMTGYFSPEMSFAMHMTARKHGM
SLQDAMAEAFNDWLRKMGESPVGK

Sequences:

>Translated_104_residues
MSRKGSLLALRDRDPAPTPASTEPEGRAAALTARSTGVGTGSSSSSSPVAPSRQGKKAMTGYFSPEMSFAMHMTARKHGM
SLQDAMAEAFNDWLRKMGESPVGK
>Mature_103_residues
SRKGSLLALRDRDPAPTPASTEPEGRAAALTARSTGVGTGSSSSSSPVAPSRQGKKAMTGYFSPEMSFAMHMTARKHGMS
LQDAMAEAFNDWLRKMGESPVGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10961; Mature: 10829

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.7 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKGSLLALRDRDPAPTPASTEPEGRAAALTARSTGVGTGSSSSSSPVAPSRQGKKAMT
CCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
GYFSPEMSFAMHMTARKHGMSLQDAMAEAFNDWLRKMGESPVGK
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SRKGSLLALRDRDPAPTPASTEPEGRAAALTARSTGVGTGSSSSSSPVAPSRQGKKAMT
CCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
GYFSPEMSFAMHMTARKHGMSLQDAMAEAFNDWLRKMGESPVGK
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA