Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

Click here to switch to the map view.

The map label for this gene is dinJ [C]

Identifier: 148550557

GI number: 148550557

Start: 3311

End: 3577

Strand: Reverse

Name: dinJ [C]

Synonym: Swit_5118

Alternate gene names: 148550557

Gene position: 3577-3311 (Counterclockwise)

Preceding gene: 148550561

Following gene: 148550556

Centisome position: 1.15

GC content: 64.04

Gene sequence:

>267_bases
ATGGCTGTTTCCGACACCTATGTCCGCGCCAGGATCGACAATACGACGAAGGAACGCGCCACCGCCGCGCTGGGCGCGAT
GGGCCTTTCGATCTCCGACGCTATCCGACTGTTGATGCTGCGTATCGCCGACGAACGGCGCTTGCCTTTCGAGGTCAAGG
TTCCGAACGCCGCGACACGCGAGGCAATGGCAGAGCTGGCGGCGGGGAAGGGGACCAAGTTCGCCAGCGTCGATGCGCTG
ATGGCGGACCTCCGTGCGGACGATTGA

Upstream 100 bases:

>100_bases
CCACGATGCCGCGTCAGCGGCAGGCGCATAATCACCGCACCCATTGCCAAAATCAGATTTTGTGACTACGTTGGGACTAC
GTTTTCAGAAGGAAATCCCA

Downstream 100 bases:

>100_bases
TCGTTCGACCCGGTTCAAGCGCGACTACAAGCGGGAATCAAAGGGCCGGCATCGAGCGACCCTCGATGCCGATCTTCTGC
CTGTCCTGGCCGCGCTCGCG

Product: addiction module antitoxin

Products: NA

Alternate protein names: Addiction Module Antitoxin RelB/DinJ Family; Addiction Module Antitoxin; RelB Antitoxin; DNA-Damage-Inducible Protein; Damage Inducible-Like Protein

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MAVSDTYVRARIDNTTKERATAALGAMGLSISDAIRLLMLRIADERRLPFEVKVPNAATREAMAELAAGKGTKFASVDAL
MADLRADD

Sequences:

>Translated_88_residues
MAVSDTYVRARIDNTTKERATAALGAMGLSISDAIRLLMLRIADERRLPFEVKVPNAATREAMAELAAGKGTKFASVDAL
MADLRADD
>Mature_87_residues
AVSDTYVRARIDNTTKERATAALGAMGLSISDAIRLLMLRIADERRLPFEVKVPNAATREAMAELAAGKGTKFASVDALM
ADLRADD

Specific function: Unknown

COG id: COG3077

COG function: function code L; DNA-damage-inducible protein J

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9468; Mature: 9337

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSDTYVRARIDNTTKERATAALGAMGLSISDAIRLLMLRIADERRLPFEVKVPNAATR
CCCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHH
EAMAELAAGKGTKFASVDALMADLRADD
HHHHHHHCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AVSDTYVRARIDNTTKERATAALGAMGLSISDAIRLLMLRIADERRLPFEVKVPNAATR
CCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHH
EAMAELAAGKGTKFASVDALMADLRADD
HHHHHHHCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA