Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is yolJ [H]
Identifier: 148380687
GI number: 148380687
Start: 2880374
End: 2882275
Strand: Reverse
Name: yolJ [H]
Synonym: CBO2729
Alternate gene names: 148380687
Gene position: 2882275-2880374 (Counterclockwise)
Preceding gene: 148380688
Following gene: 148380686
Centisome position: 74.15
GC content: 23.87
Gene sequence:
>1902_bases ATGAAATTAAGTATAGCTATGATGGTCAAAAATGAATCAAAATATTTAGATAAGTGTCTTTCAAGTTTAAAGCCAGTTTT AGATGCTGTTTCATCAGAGCTTATTATAGTAGATACAGGTTCTACAGATAATACAGTAGAAATAGCTAAAAAATATACAG ATAAACTGTATTTTCATAATTGGAATAATGATTTTTCAGATATGAGAAATATAACTATAGATTATTGCAGTGGTGAATGG ATATTTATAATAGATGGAGATGAGGTTTTAGAAGAGCCACAGTCTATAATAGATGCTTTAACTTTAAAATTAGATAAAGA ATACAATACATTATTCATTAGAGTAAAAAGCTTACATAGTGAATATGATTTAAATTCCTATAGCATTCTAACATCCCCAA GGATATTTAAAAATGATGGTAGTTTTAAATATGAAGGTAAAGTTCATAATCAGCCAGTACATAAAGAGCCCAACCTACTT TTAAATTCAGAGATATTGCATTATGGGTATGTTACTAATGATCCAGAATTAATGGAAAGAAAATTTAAAAGAACAGCCAG CATATTAAAAAGTGAATTGGAAAAGGAACCTAATAATATATATTATTTATATCAATTGGGAAAAAGTTACTACCTACATA AGGATTTACTACAATCTATAGAACAATACGAAAAAGCCTATAGAGTTTTAGATAAGAAAAAATTAAAAAAGAATTTTGGA CAACTATATATGCCCTTTGCTTTAGCCTATTCTACTAATAAACAATATAAAGAAGCTATAAAAATATGTAAGGAAGGTAT AAAATTATTTGATGGATATTTAGATTTATATTATATTGTAGCTAATTCTTTAGAAGCTTTAGGAGATTTAGAAGAAGCTT TTTATTATTATAAGGAATTTATTAAGGTCTATGAGTATTTTTACAATTATAAAATATCACAGGATCCGGCTATAACTATT GAATATAGGAATAATAGTTATAAGGATGTAGTTCTAACAAAGCTTTCTGAGCGTAATGTAAATCTTAATAAATATGAAGA AGCTTTAAAATATGCAGTAGATATAGAAAATGAGCAGAAGAAAATAATACATTTAATAGAAATTTATATAAAGATACATC AGTATACAAGGATAAAAGATTTATATTTTGAAATAAAAGAAGAAAATAAAAATTTGTTTGTAAATAAATTAGAAGATAAA ATGGAATTAATGACCAAAGAAGAAAAGGATAAAATTAAAAATATTTTTTCAAAGGGAGGGGAAGAATATTTTAAATTAAA CCAATTTAGACTAAAGAATCCTAAAGAAAAAGATACAGATAAATTGTTAAAGGAAATAGATTTTGACAAAGTACCTAGCT TTTATGGTGAAATGATACTAAATAAGTGGGACAATAAAGCATTAGTATTTTCTATATTAAAAAGATTACAAAATAATACC CTTCAAAATATTTTTCAATGGATGATAGGACAAAATATACAAGTTTATTGGAAGGATGAAGTAGAAAAAGAAATATTAGC TTTGGAATTAGAAAAATTAGATATTCACAAAACTAGAATATATGCTATTTTAACAAAGGTAATATTATTAAATAAAATGC AACTTTATAAAATTACTAAAAATAACATAGATAAAAAATATAATGATATTTTTAAAATATATATAGAATTATATATTAAT TATATAGAGTTTATATATAATGTAGATAAATCTAGATTGTTTTATAAAAATTTAGAAGCCTCAGAAAAGCAAATGTTTTC TATAATATTTGCTAGAGAAGCTTATGAATTAGGCAAGTATTCTTTAGCTATAAAATACTTTAAAGAAGCGGCAGAACAAT ATCCATATTTAGCGGATTTATTGGGAAATTATAGCAGAAAATTATTAAAAGAAGTTTTGTAA
Upstream 100 bases:
>100_bases TTATTTTATTATAAATAAAAAATCATTATAGTAACCTATTCTTAAGAAGTCATAGATATAAACGATAATATAATATATGC TTTTGAAGGGAATGAAGACT
Downstream 100 bases:
>100_bases ATTTTAAAATAGTTGTGGAAAGGAATGAGTACTATTACGGAGTGTATTACAGAAAAAAGTAAAGATAATAAAAATATATT TAGAATAAAAAAAGATAATA
Product: glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 633; Mature: 633
Protein sequence:
>633_residues MKLSIAMMVKNESKYLDKCLSSLKPVLDAVSSELIIVDTGSTDNTVEIAKKYTDKLYFHNWNNDFSDMRNITIDYCSGEW IFIIDGDEVLEEPQSIIDALTLKLDKEYNTLFIRVKSLHSEYDLNSYSILTSPRIFKNDGSFKYEGKVHNQPVHKEPNLL LNSEILHYGYVTNDPELMERKFKRTASILKSELEKEPNNIYYLYQLGKSYYLHKDLLQSIEQYEKAYRVLDKKKLKKNFG QLYMPFALAYSTNKQYKEAIKICKEGIKLFDGYLDLYYIVANSLEALGDLEEAFYYYKEFIKVYEYFYNYKISQDPAITI EYRNNSYKDVVLTKLSERNVNLNKYEEALKYAVDIENEQKKIIHLIEIYIKIHQYTRIKDLYFEIKEENKNLFVNKLEDK MELMTKEEKDKIKNIFSKGGEEYFKLNQFRLKNPKEKDTDKLLKEIDFDKVPSFYGEMILNKWDNKALVFSILKRLQNNT LQNIFQWMIGQNIQVYWKDEVEKEILALELEKLDIHKTRIYAILTKVILLNKMQLYKITKNNIDKKYNDIFKIYIELYIN YIEFIYNVDKSRLFYKNLEASEKQMFSIIFAREAYELGKYSLAIKYFKEAAEQYPYLADLLGNYSRKLLKEVL
Sequences:
>Translated_633_residues MKLSIAMMVKNESKYLDKCLSSLKPVLDAVSSELIIVDTGSTDNTVEIAKKYTDKLYFHNWNNDFSDMRNITIDYCSGEW IFIIDGDEVLEEPQSIIDALTLKLDKEYNTLFIRVKSLHSEYDLNSYSILTSPRIFKNDGSFKYEGKVHNQPVHKEPNLL LNSEILHYGYVTNDPELMERKFKRTASILKSELEKEPNNIYYLYQLGKSYYLHKDLLQSIEQYEKAYRVLDKKKLKKNFG QLYMPFALAYSTNKQYKEAIKICKEGIKLFDGYLDLYYIVANSLEALGDLEEAFYYYKEFIKVYEYFYNYKISQDPAITI EYRNNSYKDVVLTKLSERNVNLNKYEEALKYAVDIENEQKKIIHLIEIYIKIHQYTRIKDLYFEIKEENKNLFVNKLEDK MELMTKEEKDKIKNIFSKGGEEYFKLNQFRLKNPKEKDTDKLLKEIDFDKVPSFYGEMILNKWDNKALVFSILKRLQNNT LQNIFQWMIGQNIQVYWKDEVEKEILALELEKLDIHKTRIYAILTKVILLNKMQLYKITKNNIDKKYNDIFKIYIELYIN YIEFIYNVDKSRLFYKNLEASEKQMFSIIFAREAYELGKYSLAIKYFKEAAEQYPYLADLLGNYSRKLLKEVL >Mature_633_residues MKLSIAMMVKNESKYLDKCLSSLKPVLDAVSSELIIVDTGSTDNTVEIAKKYTDKLYFHNWNNDFSDMRNITIDYCSGEW IFIIDGDEVLEEPQSIIDALTLKLDKEYNTLFIRVKSLHSEYDLNSYSILTSPRIFKNDGSFKYEGKVHNQPVHKEPNLL LNSEILHYGYVTNDPELMERKFKRTASILKSELEKEPNNIYYLYQLGKSYYLHKDLLQSIEQYEKAYRVLDKKKLKKNFG QLYMPFALAYSTNKQYKEAIKICKEGIKLFDGYLDLYYIVANSLEALGDLEEAFYYYKEFIKVYEYFYNYKISQDPAITI EYRNNSYKDVVLTKLSERNVNLNKYEEALKYAVDIENEQKKIIHLIEIYIKIHQYTRIKDLYFEIKEENKNLFVNKLEDK MELMTKEEKDKIKNIFSKGGEEYFKLNQFRLKNPKEKDTDKLLKEIDFDKVPSFYGEMILNKWDNKALVFSILKRLQNNT LQNIFQWMIGQNIQVYWKDEVEKEILALELEKLDIHKTRIYAILTKVILLNKMQLYKITKNNIDKKYNDIFKIYIELYIN YIEFIYNVDKSRLFYKNLEASEKQMFSIIFAREAYELGKYSLAIKYFKEAAEQYPYLADLLGNYSRKLLKEVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 - InterPro: IPR011990 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 75594; Mature: 75594
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: PS50293 TPR_REGION ; PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSIAMMVKNESKYLDKCLSSLKPVLDAVSSELIIVDTGSTDNTVEIAKKYTDKLYFHN CCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHEEEC WNNDFSDMRNITIDYCSGEWIFIIDGDEVLEEPQSIIDALTLKLDKEYNTLFIRVKSLHS CCCCHHHHCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHC EYDLNSYSILTSPRIFKNDGSFKYEGKVHNQPVHKEPNLLLNSEILHYGYVTNDPELMER CCCCCCEEEEECCCEEECCCCEEECCCCCCCCCCCCCCEEECCCCEEECCCCCCHHHHHH KFKRTASILKSELEKEPNNIYYLYQLGKSYYLHKDLLQSIEQYEKAYRVLDKKKLKKNFG HHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QLYMPFALAYSTNKQYKEAIKICKEGIKLFDGYLDLYYIVANSLEALGDLEEAFYYYKEF CEEHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKVYEYFYNYKISQDPAITIEYRNNSYKDVVLTKLSERNVNLNKYEEALKYAVDIENEQK HHHHHHHHCCEECCCCEEEEEECCCCCCHHHHEEHHCCCCCHHHHHHHHHHHHCCCCHHH KIIHLIEIYIKIHQYTRIKDLYFEIKEENKNLFVNKLEDKMELMTKEEKDKIKNIFSKGG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCC EEYFKLNQFRLKNPKEKDTDKLLKEIDFDKVPSFYGEMILNKWDNKALVFSILKRLQNNT HHHHHHHHHHCCCCCCCCHHHHHHHCCHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCH LQNIFQWMIGQNIQVYWKDEVEKEILALELEKLDIHKTRIYAILTKVILLNKMQLYKITK HHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHH NNIDKKYNDIFKIYIELYINYIEFIYNVDKSRLFYKNLEASEKQMFSIIFAREAYELGKY HCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH SLAIKYFKEAAEQYPYLADLLGNYSRKLLKEVL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKLSIAMMVKNESKYLDKCLSSLKPVLDAVSSELIIVDTGSTDNTVEIAKKYTDKLYFHN CCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHEEEC WNNDFSDMRNITIDYCSGEWIFIIDGDEVLEEPQSIIDALTLKLDKEYNTLFIRVKSLHS CCCCHHHHCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHC EYDLNSYSILTSPRIFKNDGSFKYEGKVHNQPVHKEPNLLLNSEILHYGYVTNDPELMER CCCCCCEEEEECCCEEECCCCEEECCCCCCCCCCCCCCEEECCCCEEECCCCCCHHHHHH KFKRTASILKSELEKEPNNIYYLYQLGKSYYLHKDLLQSIEQYEKAYRVLDKKKLKKNFG HHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QLYMPFALAYSTNKQYKEAIKICKEGIKLFDGYLDLYYIVANSLEALGDLEEAFYYYKEF CEEHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKVYEYFYNYKISQDPAITIEYRNNSYKDVVLTKLSERNVNLNKYEEALKYAVDIENEQK HHHHHHHHCCEECCCCEEEEEECCCCCCHHHHEEHHCCCCCHHHHHHHHHHHHCCCCHHH KIIHLIEIYIKIHQYTRIKDLYFEIKEENKNLFVNKLEDKMELMTKEEKDKIKNIFSKGG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCC EEYFKLNQFRLKNPKEKDTDKLLKEIDFDKVPSFYGEMILNKWDNKALVFSILKRLQNNT HHHHHHHHHHCCCCCCCCHHHHHHHCCHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCH LQNIFQWMIGQNIQVYWKDEVEKEILALELEKLDIHKTRIYAILTKVILLNKMQLYKITK HHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHH NNIDKKYNDIFKIYIELYINYIEFIYNVDKSRLFYKNLEASEKQMFSIIFAREAYELGKY HCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH SLAIKYFKEAAEQYPYLADLLGNYSRKLLKEVL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 9579063 [H]