Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is 148380686
Identifier: 148380686
GI number: 148380686
Start: 2878646
End: 2880361
Strand: Reverse
Name: 148380686
Synonym: CBO2728
Alternate gene names: NA
Gene position: 2880361-2878646 (Counterclockwise)
Preceding gene: 148380687
Following gene: 148380685
Centisome position: 74.1
GC content: 21.97
Gene sequence:
>1716_bases TTGTGGAAAGGAATGAGTACTATTACGGAGTGTATTACAGAAAAAAGTAAAGATAATAAAAATATATTTAGAATAAAAAA AGATAATAAATGGATATATATAGGGAGTAAGTACTCTGTTTCTAGAGATGTAGATAATTTTATAAATAAAACCTTGAAAA TAATAAATGATGAACAGTTATTAGTTATTTTTGGTTTAGGAGCGGGAGAACATATAATAAAATTATTGTCTTATTTATCA CAACAAAATAAAGTAATTATAATAGAACCTAATAATTCTGTTATAAACTCTTTTAGACAATTAGGATACTATAAAGAAAT TATATTGGACAAAAGAATAGAAATAGCTAGATATGATAGTATAATTTTAGAAAATATTATTAGTAAATATATTAACAATA TGATTAACATGGAATTTTTAATATATGCTAATTATGACAAAATATACAACAAAGAGATTTTAAAAACTATAGAAATTTTA AAAAAATATAAAAAAGATAAATCCTTAGAAAATAATACATTAATAAATTGTGGTAAAAATAATTGGATTAATTATGTTAA TAATCTTAATAGTATAATAAACAGTATCCCTATAAATAATATAAAAGATTTATATAAAGGGAAATCAGCTATAATAGTGT CTGCAGGACCATCTCTAGATAAGAATATATATTTATTAAAAGAATATAGGGAGAATTTTATAATAATATGTGGCTTAAGA ACACTAAAACCATTATTGGATATAGGCGTAAAACCAGATTTTATTTGTGTAATAGATTTTGGTGATAAAATATATGAGTT AGGACATCCTTTTTTAAATTTTAATATTCCATTAGTTTATCACATAGCTTCTAATTATAATTTTATAAGGGAATATAAAG GTCCTAAAATATTTTTTAATACCTATAACATAGAAAAAAATTATTTAGATAATTTAATAAACAAAAAAGTAGATTCAATA ATACAAGGTGGCTCAGTAGCTCATGTATGTATGGGACTAGCTATTTACTTAGGATGTAATAATATAATTTTTATAGGACA AGATCTAGCTTATACAGGAGAAAGGCTTCACTCAAATAGTTCTACTCTTGAAACTGAAGGTGGAAATATAGGTATGTATG ATGATAATATATATGTAGATGGTATAAATGGAAATAAGGTTAGGACAAGCTGTGAATTGGATGCTTATAGAAGATATATA GAATTTTATATTCATATGCTTAAAAATATTAACTTTATAAATAGTACTGAAGGTGGGGCAAACATAAAGGGTACAAAAGT AATGCCTTTAAAAGAATCCTTAAATAAATATGGTAAATTTGTCAGTAAAAAAAATATTGAACAATTATGTGAAAAATTTT ATATAGATAAAAACTATGCAATATTAAAAATTAATAACATTAAAGATTATATAGAAGAAGATATAAAAAATGCTGAAGAG TATTTTAAAAATTTATCTAAAAATAGTATCGATTCTAAAAGTATAAAAATTTATATAGAAGCTATTTTAAGCCATAAATA TTGGGATTTTATTTATTGGATAATATACCCTGTAATATTAAAATCAAATAATAAACAATTTTATACTAAGTTTTCTATGA ATAAGGACGAAAAAATAAATGTGATAAAAAATAAATATCATTTTCTTTTAAGTAGTATAGAAAATGAATTAGAAGGAGCA TTAAATATATTAAATAAGCTTGAGGTGGAGGATTAA
Upstream 100 bases:
>100_bases ATACTTTAAAGAAGCGGCAGAACAATATCCATATTTAGCGGATTTATTGGGAAATTATAGCAGAAAATTATTAAAAGAAG TTTTGTAAATTTTAAAATAG
Downstream 100 bases:
>100_bases AAGATGAATGAAAAAATAGAAGCGTTAAGAACTGCAAGTGAATATATATTAAATTTAAAAAATGGAATAAAAACAGCATC CGAAAATTTTCAAAATGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: TPR Repeat-Containing Protein; PseD Protein
Number of amino acids: Translated: 571; Mature: 571
Protein sequence:
>571_residues MWKGMSTITECITEKSKDNKNIFRIKKDNKWIYIGSKYSVSRDVDNFINKTLKIINDEQLLVIFGLGAGEHIIKLLSYLS QQNKVIIIEPNNSVINSFRQLGYYKEIILDKRIEIARYDSIILENIISKYINNMINMEFLIYANYDKIYNKEILKTIEIL KKYKKDKSLENNTLINCGKNNWINYVNNLNSIINSIPINNIKDLYKGKSAIIVSAGPSLDKNIYLLKEYRENFIIICGLR TLKPLLDIGVKPDFICVIDFGDKIYELGHPFLNFNIPLVYHIASNYNFIREYKGPKIFFNTYNIEKNYLDNLINKKVDSI IQGGSVAHVCMGLAIYLGCNNIIFIGQDLAYTGERLHSNSSTLETEGGNIGMYDDNIYVDGINGNKVRTSCELDAYRRYI EFYIHMLKNINFINSTEGGANIKGTKVMPLKESLNKYGKFVSKKNIEQLCEKFYIDKNYAILKINNIKDYIEEDIKNAEE YFKNLSKNSIDSKSIKIYIEAILSHKYWDFIYWIIYPVILKSNNKQFYTKFSMNKDEKINVIKNKYHFLLSSIENELEGA LNILNKLEVED
Sequences:
>Translated_571_residues MWKGMSTITECITEKSKDNKNIFRIKKDNKWIYIGSKYSVSRDVDNFINKTLKIINDEQLLVIFGLGAGEHIIKLLSYLS QQNKVIIIEPNNSVINSFRQLGYYKEIILDKRIEIARYDSIILENIISKYINNMINMEFLIYANYDKIYNKEILKTIEIL KKYKKDKSLENNTLINCGKNNWINYVNNLNSIINSIPINNIKDLYKGKSAIIVSAGPSLDKNIYLLKEYRENFIIICGLR TLKPLLDIGVKPDFICVIDFGDKIYELGHPFLNFNIPLVYHIASNYNFIREYKGPKIFFNTYNIEKNYLDNLINKKVDSI IQGGSVAHVCMGLAIYLGCNNIIFIGQDLAYTGERLHSNSSTLETEGGNIGMYDDNIYVDGINGNKVRTSCELDAYRRYI EFYIHMLKNINFINSTEGGANIKGTKVMPLKESLNKYGKFVSKKNIEQLCEKFYIDKNYAILKINNIKDYIEEDIKNAEE YFKNLSKNSIDSKSIKIYIEAILSHKYWDFIYWIIYPVILKSNNKQFYTKFSMNKDEKINVIKNKYHFLLSSIENELEGA LNILNKLEVED >Mature_571_residues MWKGMSTITECITEKSKDNKNIFRIKKDNKWIYIGSKYSVSRDVDNFINKTLKIINDEQLLVIFGLGAGEHIIKLLSYLS QQNKVIIIEPNNSVINSFRQLGYYKEIILDKRIEIARYDSIILENIISKYINNMINMEFLIYANYDKIYNKEILKTIEIL KKYKKDKSLENNTLINCGKNNWINYVNNLNSIINSIPINNIKDLYKGKSAIIVSAGPSLDKNIYLLKEYRENFIIICGLR TLKPLLDIGVKPDFICVIDFGDKIYELGHPFLNFNIPLVYHIASNYNFIREYKGPKIFFNTYNIEKNYLDNLINKKVDSI IQGGSVAHVCMGLAIYLGCNNIIFIGQDLAYTGERLHSNSSTLETEGGNIGMYDDNIYVDGINGNKVRTSCELDAYRRYI EFYIHMLKNINFINSTEGGANIKGTKVMPLKESLNKYGKFVSKKNIEQLCEKFYIDKNYAILKINNIKDYIEEDIKNAEE YFKNLSKNSIDSKSIKIYIEAILSHKYWDFIYWIIYPVILKSNNKQFYTKFSMNKDEKINVIKNKYHFLLSSIENELEGA LNILNKLEVED
Specific function: Unknown
COG id: COG2604
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66436; Mature: 66436
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWKGMSTITECITEKSKDNKNIFRIKKDNKWIYIGSKYSVSRDVDNFINKTLKIINDEQL CCCCHHHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEE LVIFGLGAGEHIIKLLSYLSQQNKVIIIEPNNSVINSFRQLGYYKEIILDKRIEIARYDS EEEEECCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH IILENIISKYINNMINMEFLIYANYDKIYNKEILKTIEILKKYKKDKSLENNTLINCGKN HHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCC NWINYVNNLNSIINSIPINNIKDLYKGKSAIIVSAGPSLDKNIYLLKEYRENFIIICGLR CHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCEEEEECHH TLKPLLDIGVKPDFICVIDFGDKIYELGHPFLNFNIPLVYHIASNYNFIREYKGPKIFFN HHHHHHHCCCCCCEEEEECCCCHHHHHCCCEEECCCCEEEEEECCCCCHHHCCCCEEEEE TYNIEKNYLDNLINKKVDSIIQGGSVAHVCMGLAIYLGCNNIIFIGQDLAYTGERLHSNS EECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCC STLETEGGNIGMYDDNIYVDGINGNKVRTSCELDAYRRYIEFYIHMLKNINFINSTEGGA CEEEECCCEEEEECCCEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEECCCCCC NIKGTKVMPLKESLNKYGKFVSKKNIEQLCEKFYIDKNYAILKINNIKDYIEEDIKNAEE CCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHH YFKNLSKNSIDSKSIKIYIEAILSHKYWDFIYWIIYPVILKSNNKQFYTKFSMNKDEKIN HHHHCCCCCCCCCHHEEHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCH VIKNKYHFLLSSIENELEGALNILNKLEVED HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MWKGMSTITECITEKSKDNKNIFRIKKDNKWIYIGSKYSVSRDVDNFINKTLKIINDEQL CCCCHHHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEE LVIFGLGAGEHIIKLLSYLSQQNKVIIIEPNNSVINSFRQLGYYKEIILDKRIEIARYDS EEEEECCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH IILENIISKYINNMINMEFLIYANYDKIYNKEILKTIEILKKYKKDKSLENNTLINCGKN HHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCC NWINYVNNLNSIINSIPINNIKDLYKGKSAIIVSAGPSLDKNIYLLKEYRENFIIICGLR CHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCEEEEECHH TLKPLLDIGVKPDFICVIDFGDKIYELGHPFLNFNIPLVYHIASNYNFIREYKGPKIFFN HHHHHHHCCCCCCEEEEECCCCHHHHHCCCEEECCCCEEEEEECCCCCHHHCCCCEEEEE TYNIEKNYLDNLINKKVDSIIQGGSVAHVCMGLAIYLGCNNIIFIGQDLAYTGERLHSNS EECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCC STLETEGGNIGMYDDNIYVDGINGNKVRTSCELDAYRRYIEFYIHMLKNINFINSTEGGA CEEEECCCEEEEECCCEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEECCCCCC NIKGTKVMPLKESLNKYGKFVSKKNIEQLCEKFYIDKNYAILKINNIKDYIEEDIKNAEE CCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHH YFKNLSKNSIDSKSIKIYIEAILSHKYWDFIYWIIYPVILKSNNKQFYTKFSMNKDEKIN HHHHCCCCCCCCCHHEEHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCH VIKNKYHFLLSSIENELEGALNILNKLEVED HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA