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The map label for this gene is 148380638

Identifier: 148380638

GI number: 148380638

Start: 2827909

End: 2828976

Strand: Reverse

Name: 148380638

Synonym: CBO2680

Alternate gene names: NA

Gene position: 2828976-2827909 (Counterclockwise)

Preceding gene: 148380639

Following gene: 148380637

Centisome position: 72.78

GC content: 29.4

Gene sequence:

>1068_bases
ATGGAAGGAATAATGGAGTCTATAAAAAATTCTAAGGATGCATTTATAATTGCTGAAATAGGAGTTAATTATTATGATAT
AGCTAAAAAAGAAAGTATAACTGTATTAGAGGCTGCAAAGTTAATGATAAAAGAAGCTAAAAATGCTGGTGCACAGGCTG
CAAAGTTTCAGACTTATAAAGCTGGAAAAATAGCATCTAAAAAAGCACCTGCTTATTGGGATACTACTGAAGAAAACACA
AAATCCCAATATGAATTATTTACTAAGTTCGATAAATTTGGTGAAAGTGAATATGCTGAATTAGCTAAGTACTGCGAAGA
GATAGGCATAATGTTTATGTCCACTCCTTTTGATTTTGAATCAGCAGATTATCTAAATGATTTAATGGCTATATATAAAA
TATCTTCTTCAGATTTAACTAATTTACCATTTATCGAGCATATCGCAAAAAAAGGAAAACCTGTATTTATATCTACAGGT
GCTGCTACTATAGGAGAGATAGAAGCTGCAATAAATACTATATTATCAACAGGAAATAAAGAAATATGTATAATGCATTG
CGTATTAGATTATCCCACTAAATATGAAAATGCTAATTTAAACATGATAAAGCATTTGAAAGAAGTATTTCCAGGATATA
TGTTAGGATATTCAGATCATACTAAACCAGATAAAAATATGCTAGTTTTAACTAAAGCTTATGAATACGGAGCTAAGGTT
ATAGAAAAACATTTTACATTAGATAAAACTTTAATTGGGAATGATCATTATCATGCTATGGATACTAGCGATTTAGAGAC
ATTTAAGCATAATTTATACATGTTAAGTTTAATAGCAGGAGAATATTGTAAAAGACCTCTAGAATGTGAAAGCTCTTCAA
GAAAACAAGCAAGAAGAAGTTTAATTGCTAAACAGGGAATAAAAAAAGGTGAAGTGGTAACTAAAGACATGATAACTTTT
AAAAGACCAGGTACAGGAATATCTCCAATAGACTTAGATAGGATATTAGGTAGACAAGCAAAAGTTAATATAGAAGAGGA
TACCATATTAACTTGGGAATTATTTTAA

Upstream 100 bases:

>100_bases
GGATTCAAAAATATTTTTGATCTAGCTAAAGAAGAGTATAGTAAATTTAAATTAAACTTTAATATATAAAAATTAAGTTT
TAGATAAAAGGAGATATATA

Downstream 100 bases:

>100_bases
TTATTATTTTAAAAGAGGATGATTAACTATGAAAATATTAGTTACTGGTGGCGCAGGATTTATAGCATCGAATTTAGTAG
ATAAACTTATAAGTATGGGA

Product: neuB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MEGIMESIKNSKDAFIIAEIGVNYYDIAKKESITVLEAAKLMIKEAKNAGAQAAKFQTYKAGKIASKKAPAYWDTTEENT
KSQYELFTKFDKFGESEYAELAKYCEEIGIMFMSTPFDFESADYLNDLMAIYKISSSDLTNLPFIEHIAKKGKPVFISTG
AATIGEIEAAINTILSTGNKEICIMHCVLDYPTKYENANLNMIKHLKEVFPGYMLGYSDHTKPDKNMLVLTKAYEYGAKV
IEKHFTLDKTLIGNDHYHAMDTSDLETFKHNLYMLSLIAGEYCKRPLECESSSRKQARRSLIAKQGIKKGEVVTKDMITF
KRPGTGISPIDLDRILGRQAKVNIEEDTILTWELF

Sequences:

>Translated_355_residues
MEGIMESIKNSKDAFIIAEIGVNYYDIAKKESITVLEAAKLMIKEAKNAGAQAAKFQTYKAGKIASKKAPAYWDTTEENT
KSQYELFTKFDKFGESEYAELAKYCEEIGIMFMSTPFDFESADYLNDLMAIYKISSSDLTNLPFIEHIAKKGKPVFISTG
AATIGEIEAAINTILSTGNKEICIMHCVLDYPTKYENANLNMIKHLKEVFPGYMLGYSDHTKPDKNMLVLTKAYEYGAKV
IEKHFTLDKTLIGNDHYHAMDTSDLETFKHNLYMLSLIAGEYCKRPLECESSSRKQARRSLIAKQGIKKGEVVTKDMITF
KRPGTGISPIDLDRILGRQAKVNIEEDTILTWELF
>Mature_355_residues
MEGIMESIKNSKDAFIIAEIGVNYYDIAKKESITVLEAAKLMIKEAKNAGAQAAKFQTYKAGKIASKKAPAYWDTTEENT
KSQYELFTKFDKFGESEYAELAKYCEEIGIMFMSTPFDFESADYLNDLMAIYKISSSDLTNLPFIEHIAKKGKPVFISTG
AATIGEIEAAINTILSTGNKEICIMHCVLDYPTKYENANLNMIKHLKEVFPGYMLGYSDHTKPDKNMLVLTKAYEYGAKV
IEKHFTLDKTLIGNDHYHAMDTSDLETFKHNLYMLSLIAGEYCKRPLECESSSRKQARRSLIAKQGIKKGEVVTKDMITF
KRPGTGISPIDLDRILGRQAKVNIEEDTILTWELF

Specific function: Unknown

COG id: COG2089

COG function: function code M; Sialic acid synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spsE [H]

Homologues:

Organism=Homo sapiens, GI12056473, Length=350, Percent_Identity=31.4285714285714, Blast_Score=182, Evalue=6e-46,
Organism=Drosophila melanogaster, GI21357081, Length=358, Percent_Identity=27.3743016759777, Blast_Score=142, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006190
- InterPro:   IPR013785
- InterPro:   IPR013132
- InterPro:   IPR013974 [H]

Pfam domain/function: PF03102 NeuB; PF08666 SAF [H]

EC number: NA

Molecular weight: Translated: 40081; Mature: 40081

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50844 AFP_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGIMESIKNSKDAFIIAEIGVNYYDIAKKESITVLEAAKLMIKEAKNAGAQAAKFQTYK
CCHHHHHHCCCCCEEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCC
AGKIASKKAPAYWDTTEENTKSQYELFTKFDKFGESEYAELAKYCEEIGIMFMSTPFDFE
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEEECCCCCC
SADYLNDLMAIYKISSSDLTNLPFIEHIAKKGKPVFISTGAATIGEIEAAINTILSTGNK
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCC
EICIMHCVLDYPTKYENANLNMIKHLKEVFPGYMLGYSDHTKPDKNMLVLTKAYEYGAKV
CEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECHHHHHHH
IEKHFTLDKTLIGNDHYHAMDTSDLETFKHNLYMLSLIAGEYCKRPLECESSSRKQARRS
HHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
LIAKQGIKKGEVVTKDMITFKRPGTGISPIDLDRILGRQAKVNIEEDTILTWELF
HHHHCCCCCCCEEHHHHHEEECCCCCCCCCCHHHHHCCCCEEEECCCEEEEEEEC
>Mature Secondary Structure
MEGIMESIKNSKDAFIIAEIGVNYYDIAKKESITVLEAAKLMIKEAKNAGAQAAKFQTYK
CCHHHHHHCCCCCEEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCC
AGKIASKKAPAYWDTTEENTKSQYELFTKFDKFGESEYAELAKYCEEIGIMFMSTPFDFE
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEEECCCCCC
SADYLNDLMAIYKISSSDLTNLPFIEHIAKKGKPVFISTGAATIGEIEAAINTILSTGNK
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCC
EICIMHCVLDYPTKYENANLNMIKHLKEVFPGYMLGYSDHTKPDKNMLVLTKAYEYGAKV
CEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECHHHHHHH
IEKHFTLDKTLIGNDHYHAMDTSDLETFKHNLYMLSLIAGEYCKRPLECESSSRKQARRS
HHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
LIAKQGIKKGEVVTKDMITFKRPGTGISPIDLDRILGRQAKVNIEEDTILTWELF
HHHHCCCCCCCEEHHHHHEEECCCCCCCCCCHHHHHCCCCEEEECCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]