Definition Clostridium botulinum A str. ATCC 3502, complete genome.
Accession NC_009495
Length 3,886,916

Click here to switch to the map view.

The map label for this gene is rluD1

Identifier: 148379448

GI number:

Start: 1607509

End: 1608426

Strand: Direct

Name: rluD1

Synonym: CBO1476

Alternate gene names: NA

Gene position: NA

Preceding gene: 148379447

Following gene: 148379449

Centisome position: NA

GC content: NA

Gene sequence:

>918_bases
ATGGAAAAAATAAATTTACAAGTAGAAAAAGAATTTGATAATGTAAGATTAGATTTATACTTATCCAAAATATTTGAAGA
CAAATCTAGATCTTATCTTCAAGGGATTATAGATGAAGGTAATGTTCTAGTAAATAATAAAGAAAAAAAGAGAAATTATA
AATTAAAAGTTGGAGATAATATTGAAGTAAATATACCAGAACCAAAATTGCTTCAAATAGAACCAGAAGATATTAAGCTA
GATATAATATATGAAGATAAGGATGTAATAGTTGTGAATAAGCCCCAAGAAATGGTGGTACATCCTGCACCAGGAGTATA
TTCAGGAACGTTAGTTAATGCTCTTTTACATCATTGTAAAGATTTATCTGGTATAAATGGGGTAGCAAGACCTGGTATTG
TTCATAGAATAGATAAGGATACTTCAGGAATATTAGTTGTGGCAAAGAATGACATATCTCACAATAATTTAGCAGCTCAG
TTTAAAGAGCATTCAATTTCTAGAGTATATATGGCATTGGTAGAGGGCATAATAAAGGATGAACAGGGAACCATAGAGGC
GCCTATAGGTAGACACCCTGTAGATAGAATAAAAATGGCGGTAGTAAAAGATGGAAGGCATGCCGTAACTCACTACAAGG
TCATAGAGAGATTTAAAAATCATACTTTAGTAGAGTGTAGGTTAGAAACAGGAAGAACACATCAAATAAGAGTTCATATG
AGCCACATAATGCATCCTTTAGTAGGAGATCCTGTTTATGGTTATAAAAAACAAAGATTTAATCTAAAGGGACAAATGTT
GCATGCAAAGTTATTAGGCTTTATTCATCCTACTACGAGACAATATGTAGAATTTGAAAGTGAACTACCAGAATATTTCA
AGAAAATAATAAAAATCTTAAAAAATGAATTGATTTAA

Upstream 100 bases:

>100_bases
TAAAGATGTTTATTATTTCCCTACATTTAATGTAGCGGATATGTTAGTAGTTATAGGTACTGTACTACTAGCTATATACA
TATTAAAGGAAGAGTAGTTT

Downstream 100 bases:

>100_bases
TTGCAAAATAGTGATAATATATGTCTATAAATGTCACAAAAGATAAAAACATAAAATAACAGAAGATAAAATTTTCTAAG
AACAAAAGATAAAATAGTTT

Product: pseudouridine synthase, RluA family

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>305_residues
MEKINLQVEKEFDNVRLDLYLSKIFEDKSRSYLQGIIDEGNVLVNNKEKKRNYKLKVGDNIEVNIPEPKLLQIEPEDIKL
DIIYEDKDVIVVNKPQEMVVHPAPGVYSGTLVNALLHHCKDLSGINGVARPGIVHRIDKDTSGILVVAKNDISHNNLAAQ
FKEHSISRVYMALVEGIIKDEQGTIEAPIGRHPVDRIKMAVVKDGRHAVTHYKVIERFKNHTLVECRLETGRTHQIRVHM
SHIMHPLVGDPVYGYKKQRFNLKGQMLHAKLLGFIHPTTRQYVEFESELPEYFKKIIKILKNELI

Sequences:
NA

Specific function: NA

COG id: COG0564

COG function: function code J; Pseudouridylate synthases, 23S RNA-specific

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA