Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is nadA [H]
Identifier: 148379421
GI number: 148379421
Start: 1580949
End: 1581863
Strand: Reverse
Name: nadA [H]
Synonym: CBO1448
Alternate gene names: 148379421
Gene position: 1581863-1580949 (Counterclockwise)
Preceding gene: 148379423
Following gene: 148379420
Centisome position: 40.7
GC content: 29.4
Gene sequence:
>915_bases ATGAAACCAAATTTAAAAGATAAAATAGCTCATTTAAAAAAAGAAAGAAATGCCATAATACTTGCTCACTATTATCAAAG ACCTGAAATACAAGATATAGCAGATGCAGTAGGTGATTCTTACTACCTAAGTAAAATAGCGAAAGATTGTAGTGAATCCA CAATATTGTTTTGTGGGGTAAAATTTATGGCTGAAAGTGCTAAAATTCTTTCTCCTCATAAGACCGTACTTTTGCCTGTA TTTGATGCTGGATGTCCAATGGCGGATATGATATGTAAAAAAGATGTATTAGACTTAAAGAAAGATCATCCTAATGCAAA GGTAATATGCTATATAAACTCTTCTGCTGAAGTAAAGTCTGTATCTGATGTTTGTTGTACTTCATCAAATGCAATAAACA TTATAAGAAACTTACCAGAAAAAAAAATAATCTTTATTCCAGACAAAAATTTAGGAGAATATGTACAATCTCAAGTACCG GATAAAGAAATAATATTATGGAATGGTTTTTGCATAACTCACCACAAAGTAAGGTTGGGAGAAATTAAAAAAGTTAAGAG CTTACATACTGATATAAAAGTTTTGTGCCATGGAGAATGTGAAAAAGAAATTCGCCATGCCTCCGATTTTGTAGGAAGTA CAGGGGATATTATAAAATTTGCAACAGAAAGCAATAATACAAAATTTTTAATAGTTACTGAAGAAGGAATTCTTCATCAG TTAAAAATAAAAAATCCAGAAAAACAATTCTATTTCCCTGGAGAAGGAATGACCTGCATAAACATGAAAAAAACTTCTTT AAAAAATGTCTATGATAGTCTTTTAAATTTAAATTATAAAATAGAATTAGATAAAAATTTAAGATTAAAGGCCTATGATG CCCTTATAAATATGCATACTTTAGGAGGCAGATAA
Upstream 100 bases:
>100_bases TATTTATGTGTATACTTGATATTAATATTTTAGAATGATATATTTTTTATATATATGTATATACACATGTAAAATTTAGT GTATACTTCGGGAGGATTAT
Downstream 100 bases:
>100_bases CTATGAATCTTTATGCTGATGTCTTGATTGCAGGAAGCGGTGTAGCTGGATTATATTCAGCTTTAAATTTAAGAAAAGAC TTAAAAATAGTTTTAATCTC
Product: quinolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MKPNLKDKIAHLKKERNAIILAHYYQRPEIQDIADAVGDSYYLSKIAKDCSESTILFCGVKFMAESAKILSPHKTVLLPV FDAGCPMADMICKKDVLDLKKDHPNAKVICYINSSAEVKSVSDVCCTSSNAINIIRNLPEKKIIFIPDKNLGEYVQSQVP DKEIILWNGFCITHHKVRLGEIKKVKSLHTDIKVLCHGECEKEIRHASDFVGSTGDIIKFATESNNTKFLIVTEEGILHQ LKIKNPEKQFYFPGEGMTCINMKKTSLKNVYDSLLNLNYKIELDKNLRLKAYDALINMHTLGGR
Sequences:
>Translated_304_residues MKPNLKDKIAHLKKERNAIILAHYYQRPEIQDIADAVGDSYYLSKIAKDCSESTILFCGVKFMAESAKILSPHKTVLLPV FDAGCPMADMICKKDVLDLKKDHPNAKVICYINSSAEVKSVSDVCCTSSNAINIIRNLPEKKIIFIPDKNLGEYVQSQVP DKEIILWNGFCITHHKVRLGEIKKVKSLHTDIKVLCHGECEKEIRHASDFVGSTGDIIKFATESNNTKFLIVTEEGILHQ LKIKNPEKQFYFPGEGMTCINMKKTSLKNVYDSLLNLNYKIELDKNLRLKAYDALINMHTLGGR >Mature_304_residues MKPNLKDKIAHLKKERNAIILAHYYQRPEIQDIADAVGDSYYLSKIAKDCSESTILFCGVKFMAESAKILSPHKTVLLPV FDAGCPMADMICKKDVLDLKKDHPNAKVICYINSSAEVKSVSDVCCTSSNAINIIRNLPEKKIIFIPDKNLGEYVQSQVP DKEIILWNGFCITHHKVRLGEIKKVKSLHTDIKVLCHGECEKEIRHASDFVGSTGDIIKFATESNNTKFLIVTEEGILHQ LKIKNPEKQFYFPGEGMTCINMKKTSLKNVYDSLLNLNYKIELDKNLRLKAYDALINMHTLGGR
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate [H]
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786964, Length=311, Percent_Identity=35.048231511254, Blast_Score=186, Evalue=2e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003473 - InterPro: IPR023066 [H]
Pfam domain/function: PF02445 NadA [H]
EC number: =2.5.1.72 [H]
Molecular weight: Translated: 34343; Mature: 34343
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPNLKDKIAHLKKERNAIILAHYYQRPEIQDIADAVGDSYYLSKIAKDCSESTILFCGV CCCCHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEH KFMAESAKILSPHKTVLLPVFDAGCPMADMICKKDVLDLKKDHPNAKVICYINSSAEVKS HHHHCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHH VSDVCCTSSNAINIIRNLPEKKIIFIPDKNLGEYVQSQVPDKEIILWNGFCITHHKVRLG HHHHHHCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEECEEEEECCEEHH EIKKVKSLHTDIKVLCHGECEKEIRHASDFVGSTGDIIKFATESNNTKFLIVTEEGILHQ HHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCEEE LKIKNPEKQFYFPGEGMTCINMKKTSLKNVYDSLLNLNYKIELDKNLRLKAYDALINMHT EEECCCCCEEEECCCCEEEEECCHHHHHHHHHHHHCCCEEEEECCCCEEEEHHHHHHHCC LGGR CCCC >Mature Secondary Structure MKPNLKDKIAHLKKERNAIILAHYYQRPEIQDIADAVGDSYYLSKIAKDCSESTILFCGV CCCCHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEH KFMAESAKILSPHKTVLLPVFDAGCPMADMICKKDVLDLKKDHPNAKVICYINSSAEVKS HHHHCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHH VSDVCCTSSNAINIIRNLPEKKIIFIPDKNLGEYVQSQVPDKEIILWNGFCITHHKVRLG HHHHHHCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEECEEEEECCEEHH EIKKVKSLHTDIKVLCHGECEKEIRHASDFVGSTGDIIKFATESNNTKFLIVTEEGILHQ HHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCEEE LKIKNPEKQFYFPGEGMTCINMKKTSLKNVYDSLLNLNYKIELDKNLRLKAYDALINMHT EEECCCCCEEEECCCCEEEEECCHHHHHHHHHHHHCCCEEEEECCCCEEEEHHHHHHHCC LGGR CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA