| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
Click here to switch to the map view.
The map label for this gene is adhB [H]
Identifier: 148379412
GI number: 148379412
Start: 1563823
End: 1565022
Strand: Direct
Name: adhB [H]
Synonym: CBO1438
Alternate gene names: 148379412
Gene position: 1563823-1565022 (Clockwise)
Preceding gene: 148379410
Following gene: 148379413
Centisome position: 40.23
GC content: 33.33
Gene sequence:
>1200_bases ATGTGGGAATCTAAAATGGCTATAAATGAGATAAGAGAAATAAGATCCAAGACCACTGTTTATTTAGGGGTAGGAGCAAT AGAAAAAATATATGATATAGCATCGAATTTGAAAAATATGAATATAGATAAGGTACTTATTGTCACAGGAAGAGGGGCTT ACAGAAAAACTGGGGCTTGGGAATATGTTGAAAAAGCTTTGGAAAAGGAAAATATAACCTATATTTTATATAATGAAGTT ACACCAAATCCAACTGTAGATCAAGTAGACGAGGCTGCTAGAATGGGAAATGAATTAGGTGCCAAGGCGGTAATAGGTAT AGGAGGAGGAAGTCCTATAGATGCAGCTAAAAGTGTAGCAATACTTTTAGAATATAAAGATAAAACTGCAAGGGATATAT ATGAATTTAAATTTACTCCAGAAAAAGCAGCTCCAGTTATTGCAATAAATTTAACTCATGGAACAGGCACAGAAGGAGAT AGATTTGCAGTAGTCAGTATTCCAGAAAAAGAATACAAGCCAGCCATAGCCTATGATTGTATATATCCTTTATATGCTAT AGATGACCCACAACTTATGGTTAAACTACCAATACACCAAACTTGCTATGTATCAGTGGACGCTATAAATCATGTAGTAG AGGCTTCCACAAGTAAAGTAGCAAATCCATATACCATATTATTAGCAAAGGAAACCGTGAGACTAGTTTCTAGATATTTG CCACAGGCATTGCAACATCCAGGGGATCTAACAGCTAGATATTATTTAACATATGCTTCTTTAATTGCAGGTATATGTTT TGATAATGGATTACTTCATTTTACTCATGCTTTAGAACATCCATTAAGTGGAGTGAAACCAGATTTATCTCATGGTTTAG GATTAGGAATATTATTACCTGCTGTAATAAAGGAAATATATCCATCAGTATCTGAAGTTTTAGCAGATATTTTATCACCA ATAGTTTGTGGGTTGGAAGGAAATCCGGGAGAAGCTGAAATAGTAGCTAAAGGTATAGAAAAATGGTTATATAGTATAGG TATTACAGAAAAATTAACAGACTTAGGATTTAAAGAAAATGATGTGGAAAAATTGACAAAGTTAGCTTTTGAAACACCAA GCTTAGACTTATTGTTAAGTATGGCTCCAATAGATGCAGATGAAAAGGTCGTTAGTAATATATTTAGAAATTCTCTTTAA
Upstream 100 bases:
>100_bases AAACTATTGTATTTTGTTAAAAAAATAACTATAATATAAATATGATAGTTTATTTACATTATTTATATAATCTTATATAA ATTTAAGGGGGTATTTATGA
Downstream 100 bases:
>100_bases ATTTAATATAAATAGTAATTATAAAAAAGCTTTTATATAGGTCATATGAAAGCAAAAAAATTAATTTAAAATAAAACTAC CTAAAAGATGATTAATATGG
Product: iron-containing alcohol dehydrogenase
Products: NA
Alternate protein names: Alcohol dehydrogenase II; ADH II [H]
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MWESKMAINEIREIRSKTTVYLGVGAIEKIYDIASNLKNMNIDKVLIVTGRGAYRKTGAWEYVEKALEKENITYILYNEV TPNPTVDQVDEAARMGNELGAKAVIGIGGGSPIDAAKSVAILLEYKDKTARDIYEFKFTPEKAAPVIAINLTHGTGTEGD RFAVVSIPEKEYKPAIAYDCIYPLYAIDDPQLMVKLPIHQTCYVSVDAINHVVEASTSKVANPYTILLAKETVRLVSRYL PQALQHPGDLTARYYLTYASLIAGICFDNGLLHFTHALEHPLSGVKPDLSHGLGLGILLPAVIKEIYPSVSEVLADILSP IVCGLEGNPGEAEIVAKGIEKWLYSIGITEKLTDLGFKENDVEKLTKLAFETPSLDLLLSMAPIDADEKVVSNIFRNSL
Sequences:
>Translated_399_residues MWESKMAINEIREIRSKTTVYLGVGAIEKIYDIASNLKNMNIDKVLIVTGRGAYRKTGAWEYVEKALEKENITYILYNEV TPNPTVDQVDEAARMGNELGAKAVIGIGGGSPIDAAKSVAILLEYKDKTARDIYEFKFTPEKAAPVIAINLTHGTGTEGD RFAVVSIPEKEYKPAIAYDCIYPLYAIDDPQLMVKLPIHQTCYVSVDAINHVVEASTSKVANPYTILLAKETVRLVSRYL PQALQHPGDLTARYYLTYASLIAGICFDNGLLHFTHALEHPLSGVKPDLSHGLGLGILLPAVIKEIYPSVSEVLADILSP IVCGLEGNPGEAEIVAKGIEKWLYSIGITEKLTDLGFKENDVEKLTKLAFETPSLDLLLSMAPIDADEKVVSNIFRNSL >Mature_399_residues MWESKMAINEIREIRSKTTVYLGVGAIEKIYDIASNLKNMNIDKVLIVTGRGAYRKTGAWEYVEKALEKENITYILYNEV TPNPTVDQVDEAARMGNELGAKAVIGIGGGSPIDAAKSVAILLEYKDKTARDIYEFKFTPEKAAPVIAINLTHGTGTEGD RFAVVSIPEKEYKPAIAYDCIYPLYAIDDPQLMVKLPIHQTCYVSVDAINHVVEASTSKVANPYTILLAKETVRLVSRYL PQALQHPGDLTARYYLTYASLIAGICFDNGLLHFTHALEHPLSGVKPDLSHGLGLGILLPAVIKEIYPSVSEVLADILSP IVCGLEGNPGEAEIVAKGIEKWLYSIGITEKLTDLGFKENDVEKLTKLAFETPSLDLLLSMAPIDADEKVVSNIFRNSL
Specific function: Unknown
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=411, Percent_Identity=23.6009732360097, Blast_Score=102, Evalue=6e-22, Organism=Escherichia coli, GI48994951, Length=380, Percent_Identity=30.7894736842105, Blast_Score=159, Evalue=2e-40, Organism=Escherichia coli, GI87082107, Length=349, Percent_Identity=28.080229226361, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI1787493, Length=364, Percent_Identity=28.2967032967033, Blast_Score=111, Evalue=8e-26, Organism=Escherichia coli, GI1789163, Length=381, Percent_Identity=27.0341207349081, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1789386, Length=375, Percent_Identity=25.6, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17537053, Length=428, Percent_Identity=25.4672897196262, Blast_Score=132, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6321181, Length=372, Percent_Identity=32.258064516129, Blast_Score=154, Evalue=3e-38, Organism=Drosophila melanogaster, GI24657991, Length=423, Percent_Identity=24.3498817966903, Blast_Score=99, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 43785; Mature: 43785
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWESKMAINEIREIRSKTTVYLGVGAIEKIYDIASNLKNMNIDKVLIVTGRGAYRKTGAW CCCCHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCH EYVEKALEKENITYILYNEVTPNPTVDQVDEAARMGNELGAKAVIGIGGGSPIDAAKSVA HHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCHHCCCEEEEECCCCCCCHHHCCEE ILLEYKDKTARDIYEFKFTPEKAAPVIAINLTHGTGTEGDRFAVVSIPEKEYKPAIAYDC EEEEECCCCHHHHHHEEECCCCCCCEEEEEEECCCCCCCCEEEEEECCHHHCCCCEEHHH IYPLYAIDDPQLMVKLPIHQTCYVSVDAINHVVEASTSKVANPYTILLAKETVRLVSRYL HCCEEECCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHH PQALQHPGDLTARYYLTYASLIAGICFDNGLLHFTHALEHPLSGVKPDLSHGLGLGILLP HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHCCCHHHHHH AVIKEIYPSVSEVLADILSPIVCGLEGNPGEAEIVAKGIEKWLYSIGITEKLTDLGFKEN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC DVEKLTKLAFETPSLDLLLSMAPIDADEKVVSNIFRNSL HHHHHHHHHHCCCCHHEEEEECCCCCHHHHHHHHHHCCC >Mature Secondary Structure MWESKMAINEIREIRSKTTVYLGVGAIEKIYDIASNLKNMNIDKVLIVTGRGAYRKTGAW CCCCHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCH EYVEKALEKENITYILYNEVTPNPTVDQVDEAARMGNELGAKAVIGIGGGSPIDAAKSVA HHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCHHCCCEEEEECCCCCCCHHHCCEE ILLEYKDKTARDIYEFKFTPEKAAPVIAINLTHGTGTEGDRFAVVSIPEKEYKPAIAYDC EEEEECCCCHHHHHHEEECCCCCCCEEEEEEECCCCCCCCEEEEEECCHHHCCCCEEHHH IYPLYAIDDPQLMVKLPIHQTCYVSVDAINHVVEASTSKVANPYTILLAKETVRLVSRYL HCCEEECCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHH PQALQHPGDLTARYYLTYASLIAGICFDNGLLHFTHALEHPLSGVKPDLSHGLGLGILLP HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHCCCHHHHHH AVIKEIYPSVSEVLADILSPIVCGLEGNPGEAEIVAKGIEKWLYSIGITEKLTDLGFKEN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC DVEKLTKLAFETPSLDLLLSMAPIDADEKVVSNIFRNSL HHHHHHHHHHCCCCHHEEEEECCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3584063; 2308827; 2935393 [H]