Definition Clostridium botulinum A str. ATCC 3502, complete genome.
Accession NC_009495
Length 3,886,916

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The map label for this gene is yjqA [H]

Identifier: 148379353

GI number: 148379353

Start: 1502167

End: 1502544

Strand: Direct

Name: yjqA [H]

Synonym: CBO1378

Alternate gene names: 148379353

Gene position: 1502167-1502544 (Clockwise)

Preceding gene: 148379352

Following gene: 148379354

Centisome position: 38.65

GC content: 27.78

Gene sequence:

>378_bases
ATGGGATTATTTAATGGATTAATGGGAAACGCTTCAGAGGTTAATATAATGGAAGTAGAGAAAGAATATAGTAATGTATT
AGCTGAAAATGAAAGAGTAGAAAAAGCTTATAAGTTAATTCGTGATATGTTTATTTTTACAAACAAAAGATTAATTCTAG
TAGATAAGCAGGGTATGACAGCTAGGAAAACAGAATATCATTCTATTCCATACAAAGCTATAACACATTTTAGTATAGAA
ACAGCGGGCAATTTTGATTTAGATGCAGAACTTAAAATATGGATTTCAGGAACTCAACTGCCTATAGAAAAGCAATTTAA
TAAAAGTTTAAATATATATGAGCTTCAAAGTGTATTAGCTAACTATGTTTTAAAATAA

Upstream 100 bases:

>100_bases
AAAGCAGATTATAAAAAGTTATGGAACTTAGAATTTTAAAGGATTCTAGAATTTTAAAAATAAGTTTATAAAAATTAAGT
TAATTGTAGGAGGATGAAAG

Downstream 100 bases:

>100_bases
GGATTAAAAAATATGGAGAGAAAAAAATTACTAATTATATTTAGATACATAGCTATATTATTTCTTATATTTGGTATAGC
TTCTTTTGAAAAAGAAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MGLFNGLMGNASEVNIMEVEKEYSNVLAENERVEKAYKLIRDMFIFTNKRLILVDKQGMTARKTEYHSIPYKAITHFSIE
TAGNFDLDAELKIWISGTQLPIEKQFNKSLNIYELQSVLANYVLK

Sequences:

>Translated_125_residues
MGLFNGLMGNASEVNIMEVEKEYSNVLAENERVEKAYKLIRDMFIFTNKRLILVDKQGMTARKTEYHSIPYKAITHFSIE
TAGNFDLDAELKIWISGTQLPIEKQFNKSLNIYELQSVLANYVLK
>Mature_124_residues
GLFNGLMGNASEVNIMEVEKEYSNVLAENERVEKAYKLIRDMFIFTNKRLILVDKQGMTARKTEYHSIPYKAITHFSIET
AGNFDLDAELKIWISGTQLPIEKQFNKSLNIYELQSVLANYVLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012544 [H]

Pfam domain/function: PF08000 DUF1696 [H]

EC number: NA

Molecular weight: Translated: 14426; Mature: 14295

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFNGLMGNASEVNIMEVEKEYSNVLAENERVEKAYKLIRDMFIFTNKRLILVDKQGMT
CCCCCCCCCCCCCEEHEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
ARKTEYHSIPYKAITHFSIETAGNFDLDAELKIWISGTQLPIEKQFNKSLNIYELQSVLA
CCCCCCCCCCHHHHEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHCCCCCHHHHHHHHH
NYVLK
HHHCC
>Mature Secondary Structure 
GLFNGLMGNASEVNIMEVEKEYSNVLAENERVEKAYKLIRDMFIFTNKRLILVDKQGMT
CCCCCCCCCCCCEEHEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
ARKTEYHSIPYKAITHFSIETAGNFDLDAELKIWISGTQLPIEKQFNKSLNIYELQSVLA
CCCCCCCCCCHHHHEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHCCCCCHHHHHHHHH
NYVLK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]