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The map label for this gene is ydfM [H]

Identifier: 148379255

GI number: 148379255

Start: 1388628

End: 1389503

Strand: Reverse

Name: ydfM [H]

Synonym: CBO1274

Alternate gene names: 148379255

Gene position: 1389503-1388628 (Counterclockwise)

Preceding gene: 148379262

Following gene: 148379239

Centisome position: 35.75

GC content: 29.11

Gene sequence:

>876_bases
ATGGAAAATGAAGAAAGGTTAAAAATAGGTAATAAAGTTTCTAATATAACCATTATAGTAAATATAATTTTGTCCTTTAT
AAAAGTACTATTTGGAATCATAGGACATAGTGCTGCTACTATTGCAGACGGTATACATTCTCTCTCTGATGTTTTAAGCA
CTATTGCAGTAATCATAGGTCTTAAAATTTCTTCTAAACCTGCAGATAAAGACCACCCCTATGGTCATGAAAAACTTGAA
GCAGTAACTTCTAAATTATTAGCTACTATGTTATTTTTAACTGCTTTGTTCATAGGCTATAGTGGAATAAAGGTTATAAT
AAATAAAGATTTTTCTGTTCCTTCAAAAATAACTATTTATGTTGCTATTTTATCCATAGTCACAAAGGAATGGATGTACA
GATATACTTTAAAGGCAGCTAAAAAAATAAACAGTACAGCCCTTGAAGCAGATGCCTGGCATCATAGATCAGATTCTTTC
TCATCTATAGGAACACTTATAGGAATAGTTGGAGCTAGACTTAAATATCCAATATTAGACCCTATAGCATCTTTAGTAAT
ATGTATATTTATAATTAAAGTTTCTATAGATATTTATAAGAATTCTATAAATCAACTTGTAGATCACTGTGCTGATGAAA
AAACTATTAATATGATAACAGAACAAATTAAATCTATTAAAGAAGTAGAAAGAATAGATGAATTAAAAACTAGGCTTCAT
GGAAGCAAACTTTATGTAGATGTAGAGATTGCTCTTGATTATAGCTTATCTTTAAAAGAATCTCATAGCATAGCAGAAAA
GGTCCATGACCAAATAGAAGCAAGCAACAATGATATTATTCATTGTATGGTTCATGTAAATCCCTATGAAGAATAA

Upstream 100 bases:

>100_bases
CAATTGATAAAGCATTTCTATCTTTATTTTGTTGCATTTATGCTATGTTTAGCATATAATAATATAAATGTTTATTTTCA
ATTAATAATGAGGTGGAAAG

Downstream 100 bases:

>100_bases
TAAAGTTTTATCTTAAGATACCTTATTTAACTTTGAAAGCTGTCAAAAATATGTCTTTAATTTTAATATAGCAAAGATAA
AGAATATAGGTAATAATATA

Product: cation efflux family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MENEERLKIGNKVSNITIIVNIILSFIKVLFGIIGHSAATIADGIHSLSDVLSTIAVIIGLKISSKPADKDHPYGHEKLE
AVTSKLLATMLFLTALFIGYSGIKVIINKDFSVPSKITIYVAILSIVTKEWMYRYTLKAAKKINSTALEADAWHHRSDSF
SSIGTLIGIVGARLKYPILDPIASLVICIFIIKVSIDIYKNSINQLVDHCADEKTINMITEQIKSIKEVERIDELKTRLH
GSKLYVDVEIALDYSLSLKESHSIAEKVHDQIEASNNDIIHCMVHVNPYEE

Sequences:

>Translated_291_residues
MENEERLKIGNKVSNITIIVNIILSFIKVLFGIIGHSAATIADGIHSLSDVLSTIAVIIGLKISSKPADKDHPYGHEKLE
AVTSKLLATMLFLTALFIGYSGIKVIINKDFSVPSKITIYVAILSIVTKEWMYRYTLKAAKKINSTALEADAWHHRSDSF
SSIGTLIGIVGARLKYPILDPIASLVICIFIIKVSIDIYKNSINQLVDHCADEKTINMITEQIKSIKEVERIDELKTRLH
GSKLYVDVEIALDYSLSLKESHSIAEKVHDQIEASNNDIIHCMVHVNPYEE
>Mature_291_residues
MENEERLKIGNKVSNITIIVNIILSFIKVLFGIIGHSAATIADGIHSLSDVLSTIAVIIGLKISSKPADKDHPYGHEKLE
AVTSKLLATMLFLTALFIGYSGIKVIINKDFSVPSKITIYVAILSIVTKEWMYRYTLKAAKKINSTALEADAWHHRSDSF
SSIGTLIGIVGARLKYPILDPIASLVICIFIIKVSIDIYKNSINQLVDHCADEKTINMITEQIKSIKEVERIDELKTRLH
GSKLYVDVEIALDYSLSLKESHSIAEKVHDQIEASNNDIIHCMVHVNPYEE

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=270, Percent_Identity=22.5925925925926, Blast_Score=83, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI115533508, Length=287, Percent_Identity=23.6933797909408, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI115533506, Length=287, Percent_Identity=23.6933797909408, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI72000060, Length=276, Percent_Identity=23.5507246376812, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI72000062, Length=276, Percent_Identity=23.5507246376812, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6325032, Length=259, Percent_Identity=28.1853281853282, Blast_Score=103, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6323831, Length=230, Percent_Identity=29.5652173913043, Blast_Score=100, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 32397; Mature: 32397

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENEERLKIGNKVSNITIIVNIILSFIKVLFGIIGHSAATIADGIHSLSDVLSTIAVIIG
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LKISSKPADKDHPYGHEKLEAVTSKLLATMLFLTALFIGYSGIKVIINKDFSVPSKITIY
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHH
VAILSIVTKEWMYRYTLKAAKKINSTALEADAWHHRSDSFSSIGTLIGIVGARLKYPILD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHH
PIASLVICIFIIKVSIDIYKNSINQLVDHCADEKTINMITEQIKSIKEVERIDELKTRLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GSKLYVDVEIALDYSLSLKESHSIAEKVHDQIEASNNDIIHCMVHVNPYEE
CCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MENEERLKIGNKVSNITIIVNIILSFIKVLFGIIGHSAATIADGIHSLSDVLSTIAVIIG
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LKISSKPADKDHPYGHEKLEAVTSKLLATMLFLTALFIGYSGIKVIINKDFSVPSKITIY
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHH
VAILSIVTKEWMYRYTLKAAKKINSTALEADAWHHRSDSFSSIGTLIGIVGARLKYPILD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHH
PIASLVICIFIIKVSIDIYKNSINQLVDHCADEKTINMITEQIKSIKEVERIDELKTRLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GSKLYVDVEIALDYSLSLKESHSIAEKVHDQIEASNNDIIHCMVHVNPYEE
CCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]