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The map label for this gene is yhfR [C]

Identifier: 148379188

GI number: 148379188

Start: 1326892

End: 1327263

Strand: Direct

Name: yhfR [C]

Synonym: CBO1205

Alternate gene names: 148379188

Gene position: 1326892-1327263 (Clockwise)

Preceding gene: 148379187

Following gene: 148379189

Centisome position: 34.14

GC content: 30.11

Gene sequence:

>372_bases
ATGGATTTTAATTTTAATGAGGATATTCCTATATATCAGCAAATAGCTAATGCAATTGAGGATGGGATATTAAAAGGTAT
TTATGAAGAAGAAACCCAAATTCCATCAACAACAGAGATTTCAGTAAATTATAAGATAAATCCAGCTACAGTAGGCAAAG
GATTCAATTTGCTAGTTAGCGAAGAAATAATTTATAAGAAAAGAGGGGTAGGTATGTTTGTTTGTAGTGGTGCAAAGGAA
AAGTTAAAAGAAAAAAGAAAAAACAAATTTTTTGATAGCTACATTTTAAGTCTTGTGGATGAAGCTAAACGACTAGGAAT
AACTATAGATGAAATAATGGATATGATAAAAGGGGGATATGGCAATGAGTAA

Upstream 100 bases:

>100_bases
AAAATGTAGCGGATAATCATAAAACTGTTGACATTTTATAAGGACAGTTATATAGTTAGTCATATAAGTAATTAACCAAC
TAAGCAGTGAGGTGATAATA

Downstream 100 bases:

>100_bases
TATAGTAATAAAAAATGTTACTAAATCATACCAAAGAAAAGAAGCGTTATCAAATATTTCTATTAACATAGAAGAAGGAA
AAATATATGGTCTTCTTGGG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; Regulatory Protein GntR HTH; Transcription Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator GntR Family Protein

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MDFNFNEDIPIYQQIANAIEDGILKGIYEEETQIPSTTEISVNYKINPATVGKGFNLLVSEEIIYKKRGVGMFVCSGAKE
KLKEKRKNKFFDSYILSLVDEAKRLGITIDEIMDMIKGGYGNE

Sequences:

>Translated_123_residues
MDFNFNEDIPIYQQIANAIEDGILKGIYEEETQIPSTTEISVNYKINPATVGKGFNLLVSEEIIYKKRGVGMFVCSGAKE
KLKEKRKNKFFDSYILSLVDEAKRLGITIDEIMDMIKGGYGNE
>Mature_123_residues
MDFNFNEDIPIYQQIANAIEDGILKGIYEEETQIPSTTEISVNYKINPATVGKGFNLLVSEEIIYKKRGVGMFVCSGAKE
KLKEKRKNKFFDSYILSLVDEAKRLGITIDEIMDMIKGGYGNE

Specific function: Unknown

COG id: COG1725

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13924; Mature: 13924

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFNFNEDIPIYQQIANAIEDGILKGIYEEETQIPSTTEISVNYKINPATVGKGFNLLVS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCEEEEH
EEIIYKKRGVGMFVCSGAKEKLKEKRKNKFFDSYILSLVDEAKRLGITIDEIMDMIKGGY
HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
GNE
CCC
>Mature Secondary Structure
MDFNFNEDIPIYQQIANAIEDGILKGIYEEETQIPSTTEISVNYKINPATVGKGFNLLVS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCEEEEH
EEIIYKKRGVGMFVCSGAKEKLKEKRKNKFFDSYILSLVDEAKRLGITIDEIMDMIKGGY
HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
GNE
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA