Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is 148379123
Identifier: 148379123
GI number: 148379123
Start: 1250081
End: 1250545
Strand: Direct
Name: 148379123
Synonym: CBO1136
Alternate gene names: NA
Gene position: 1250081-1250545 (Clockwise)
Preceding gene: 148379122
Following gene: 148379124
Centisome position: 32.16
GC content: 23.87
Gene sequence:
>465_bases ATGGCATACACAATAATAGATATAATAAATAATTTGATAGATATTGAGAAAAAAGGCTTTAGTATATTTAGAGAAATAAG TAATAATTGTGAAGATCTTAGGATTTCTATAGTTTCTAAAACTATTGCTAATCAAGAAAGGAAGTATACACAATATTATG AAAATCTCAAAAAAGATATAGATGTATTAGACAAAGAAGATATAGATTTTTCTATATATGATAGAATATCATCTAGAATG CAACAATTTAAAATTTCTATAACTATGCCTGTAGTAACGGATATAAAAAAGTTAATAAATTTTGCTAGAGAACTTTCAAA AGAAAATTTAGCTTTATTAATATATATACAAGGACAACTAATAAGAAAAGAAACAGATACTAATATGTTAGCTTATAATA TTATGGGGAAAATAATAGAGGAACAGGAAAAGTATTCGAAATCTCTAAAGGCGCTTTATAAGTAG
Upstream 100 bases:
>100_bases TTGGCCTTATGAAATAGAAAGTTAGTTTTTTAGATTTATTTATAATGAGTAGTCGGTATATACAAAAATATATACTAAAG TTTAGGGAGGACATAATTTA
Downstream 100 bases:
>100_bases TTTTAAAATATACTTGTGATACAATATTATTTATATATTTTTAATTTAAATATATGTTATAAACAATAGATAGTAACTAA AAAAGGAAGGCCTCTAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MAYTIIDIINNLIDIEKKGFSIFREISNNCEDLRISIVSKTIANQERKYTQYYENLKKDIDVLDKEDIDFSIYDRISSRM QQFKISITMPVVTDIKKLINFARELSKENLALLIYIQGQLIRKETDTNMLAYNIMGKIIEEQEKYSKSLKALYK
Sequences:
>Translated_154_residues MAYTIIDIINNLIDIEKKGFSIFREISNNCEDLRISIVSKTIANQERKYTQYYENLKKDIDVLDKEDIDFSIYDRISSRM QQFKISITMPVVTDIKKLINFARELSKENLALLIYIQGQLIRKETDTNMLAYNIMGKIIEEQEKYSKSLKALYK >Mature_153_residues AYTIIDIINNLIDIEKKGFSIFREISNNCEDLRISIVSKTIANQERKYTQYYENLKKDIDVLDKEDIDFSIYDRISSRMQ QFKISITMPVVTDIKKLINFARELSKENLALLIYIQGQLIRKETDTNMLAYNIMGKIIEEQEKYSKSLKALYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18164; Mature: 18033
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYTIIDIINNLIDIEKKGFSIFREISNNCEDLRISIVSKTIANQERKYTQYYENLKKDI CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVLDKEDIDFSIYDRISSRMQQFKISITMPVVTDIKKLINFARELSKENLALLIYIQGQL HHCCCCCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCH IRKETDTNMLAYNIMGKIIEEQEKYSKSLKALYK HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AYTIIDIINNLIDIEKKGFSIFREISNNCEDLRISIVSKTIANQERKYTQYYENLKKDI HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVLDKEDIDFSIYDRISSRMQQFKISITMPVVTDIKKLINFARELSKENLALLIYIQGQL HHCCCCCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCH IRKETDTNMLAYNIMGKIIEEQEKYSKSLKALYK HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA