Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is pspE [H]
Identifier: 148379122
GI number: 148379122
Start: 1249694
End: 1250005
Strand: Direct
Name: pspE [H]
Synonym: CBO1135
Alternate gene names: 148379122
Gene position: 1249694-1250005 (Clockwise)
Preceding gene: 148379121
Following gene: 148379123
Centisome position: 32.15
GC content: 29.17
Gene sequence:
>312_bases ATGTATATTAATACAATAACGCCAGAAGAAGCTAAGAAAATGCTAGATGAAAGAGAAGATATAACAATTTTAGATGTAAG AGGCGAAAATGAATATAGGGAAGGTCATATAAAAGGTAGTAAATCAATACCACTAGAATTTTTAGAGACAAATGTTGAAG ATGAAGTGCCAGATAAAAATTCTACAATTTTTATATATTGTCAAAGTGGAAAAAAAGCTAAAGTTGGCTATGAATATTTA AAGGAGTTAGGTTATGACAATGTATATGATATGGGTGGAATAATGGATTGGCCTTATGAAATAGAAAGTTAG
Upstream 100 bases:
>100_bases CATTAATATTTGTAGAGCTTTTCCCAATTTAGTTTAAATTAATATAATAGCAGTATATAAATACAAAAAAATAATAATAT AGAAAGAAGATGAATTTTAA
Downstream 100 bases:
>100_bases TTTTTTAGATTTATTTATAATGAGTAGTCGGTATATACAAAAATATATACTAAAGTTTAGGGAGGACATAATTTAATGGC ATACACAATAATAGATATAA
Product: putative phage shock protein
Products: NA
Alternate protein names: TST; Phage shock protein E [H]
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MYINTITPEEAKKMLDEREDITILDVRGENEYREGHIKGSKSIPLEFLETNVEDEVPDKNSTIFIYCQSGKKAKVGYEYL KELGYDNVYDMGGIMDWPYEIES
Sequences:
>Translated_103_residues MYINTITPEEAKKMLDEREDITILDVRGENEYREGHIKGSKSIPLEFLETNVEDEVPDKNSTIFIYCQSGKKAKVGYEYL KELGYDNVYDMGGIMDWPYEIES >Mature_103_residues MYINTITPEEAKKMLDEREDITILDVRGENEYREGHIKGSKSIPLEFLETNVEDEVPDKNSTIFIYCQSGKKAKVGYEYL KELGYDNVYDMGGIMDWPYEIES
Specific function: The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions. PspE catalyzes the sulfur-transfer reaction from thiosulfate to cyanide, to form sulfite and thiocyan
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
Organism=Escherichia coli, GI1787567, Length=73, Percent_Identity=36.986301369863, Blast_Score=65, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014323 - InterPro: IPR001763 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.1 [H]
Molecular weight: Translated: 11982; Mature: 11982
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYINTITPEEAKKMLDEREDITILDVRGENEYREGHIKGSKSIPLEFLETNVEDEVPDKN CCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC STIFIYCQSGKKAKVGYEYLKELGYDNVYDMGGIMDWPYEIES CEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEECC >Mature Secondary Structure MYINTITPEEAKKMLDEREDITILDVRGENEYREGHIKGSKSIPLEFLETNVEDEVPDKN CCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC STIFIYCQSGKKAKVGYEYLKELGYDNVYDMGGIMDWPYEIES CEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1712397; 9097039; 9278503; 9868784 [H]