| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is glpT [H]
Identifier: 148379061
GI number: 148379061
Start: 1180573
End: 1181910
Strand: Direct
Name: glpT [H]
Synonym: CBO1071
Alternate gene names: 148379061
Gene position: 1180573-1181910 (Clockwise)
Preceding gene: 148379060
Following gene: 148379062
Centisome position: 30.37
GC content: 32.44
Gene sequence:
>1338_bases ATGTTAAAGGACTTATTTAAACCGGCTTCTCACATAGAAAGAATGCCAAAGGAAAAAATTGATTCGGCTTATAGGCGGTA TCGTATACAGGTATTTATAAGTATTTATGTAGGATATCTAACTTATTATTTTGTAAGAAGTAATTTTTCTTTGGCAAAGG TTTACTTAATACAAGAAGGTTTTACTAAGACTCAATTAGGTTTTGTAGCTTCAGCTCTTGGTCTTGCTTATGGAGTAAGT AAATTTGTAATGGGAAACTTATCAGATAGATCTAATCCTAGATATTTTTTAGCAGCAGGATTAATTCTATCTGGTATTGT AAACCTATTCTTTCCTATGACTAAAAGTATCACAGCAATGTTTGCATTAATGCTTTTAAATGGATGGTTTCAAGGTATGG GATGGCCACCTTGTGGAAGAACTATGACTCATTGGTTCTCAGACAAAGAGCGTGGAGTAAAAATGTCAATATGGAATACA GCTCATAACGTAGGTGGAGGTTTTATTGCCACAGTAGTTTTAATAGGAGTATCTATATTTGGAAGTTGGAAGGGAGCTTT TTATCTACCAGCCGTAATAGCTATTGTAGTAGGAATTTTATTTATATTATTTGCAAAGGATACACCTCAATCAGTGGGGC TTCCACCAATAGAAGAATACAAAAATGATTATCCAGAAATTCAAGTAGAGGATAGAGAAAAAGAATTATCAGGAAAAGAA ATATTATTTAAATATGTTTTAAATAATAAATATTTATGGTATATAGCTATAGCAAATATTTTTGTATATCTTGTTAGATA TGGGGTTATAAATTGGGTACCTACATACTTAAAAGAAGTTAAACATTTTAATCCTAAAGATTCATCTTTAGCTTTTGCTT TGTTTGAATATGCAGCAATACCAGGAACCATATTTGTTGGATGGTTAAGTGATAAAGTCTTTAACGGAAGACGTGCACCT GTCGGAGTATTTTGTATGATAGGTGTAACTATAGCAACTTATGTATATTGGAAAAGCAATAGTATATTAGCAATAAATTG TGCCCTATCTTCTATAGGAGCTTTAATATATGGACCAGTTATGTTAATAGGCGTAAGTGCTTTAGATTTAGTTCCTAAAA AAGCAGCAGGTACGGCAGCAGGCTTTACAGGTTTATTTGGATATATGGGGGGACAAGTATTAGCAGAAGTAGCAATGGGA GCAGTTGTTGATAAATTTAGTTGGAATGGAGGGTTTATTTTATTAATGATATCCTCTGTATTAGCTATAGTATTTTTATC TTTTACTTGGAATACCCATGATAGATCAGAAAAAGGGCCTGATAAAGTAGCAGTTTAA
Upstream 100 bases:
>100_bases TGTAAAAATTAAATATCAATAAGGATAGCTAATATAATATTAGCTATCCTTATTGACGGTTAATAAATATTGACAATAAA AGGAAAGAGGGAATGACATA
Downstream 100 bases:
>100_bases AAATAGAATATATTTTTAAAACTTGACAAAAATAATAAATAAAGCATATAATAGATTATAAATTTTAAAGTAAAATATTT ATATTCATTGATGAGAAGAG
Product: glycerol-3-phosphate transporter
Products: Proton [Cytoplasm]; glycerol-3-phosphate [Cytoplasm] [C]
Alternate protein names: G-3-P transporter; G-3-P permease [H]
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MLKDLFKPASHIERMPKEKIDSAYRRYRIQVFISIYVGYLTYYFVRSNFSLAKVYLIQEGFTKTQLGFVASALGLAYGVS KFVMGNLSDRSNPRYFLAAGLILSGIVNLFFPMTKSITAMFALMLLNGWFQGMGWPPCGRTMTHWFSDKERGVKMSIWNT AHNVGGGFIATVVLIGVSIFGSWKGAFYLPAVIAIVVGILFILFAKDTPQSVGLPPIEEYKNDYPEIQVEDREKELSGKE ILFKYVLNNKYLWYIAIANIFVYLVRYGVINWVPTYLKEVKHFNPKDSSLAFALFEYAAIPGTIFVGWLSDKVFNGRRAP VGVFCMIGVTIATYVYWKSNSILAINCALSSIGALIYGPVMLIGVSALDLVPKKAAGTAAGFTGLFGYMGGQVLAEVAMG AVVDKFSWNGGFILLMISSVLAIVFLSFTWNTHDRSEKGPDKVAV
Sequences:
>Translated_445_residues MLKDLFKPASHIERMPKEKIDSAYRRYRIQVFISIYVGYLTYYFVRSNFSLAKVYLIQEGFTKTQLGFVASALGLAYGVS KFVMGNLSDRSNPRYFLAAGLILSGIVNLFFPMTKSITAMFALMLLNGWFQGMGWPPCGRTMTHWFSDKERGVKMSIWNT AHNVGGGFIATVVLIGVSIFGSWKGAFYLPAVIAIVVGILFILFAKDTPQSVGLPPIEEYKNDYPEIQVEDREKELSGKE ILFKYVLNNKYLWYIAIANIFVYLVRYGVINWVPTYLKEVKHFNPKDSSLAFALFEYAAIPGTIFVGWLSDKVFNGRRAP VGVFCMIGVTIATYVYWKSNSILAINCALSSIGALIYGPVMLIGVSALDLVPKKAAGTAAGFTGLFGYMGGQVLAEVAMG AVVDKFSWNGGFILLMISSVLAIVFLSFTWNTHDRSEKGPDKVAV >Mature_445_residues MLKDLFKPASHIERMPKEKIDSAYRRYRIQVFISIYVGYLTYYFVRSNFSLAKVYLIQEGFTKTQLGFVASALGLAYGVS KFVMGNLSDRSNPRYFLAAGLILSGIVNLFFPMTKSITAMFALMLLNGWFQGMGWPPCGRTMTHWFSDKERGVKMSIWNT AHNVGGGFIATVVLIGVSIFGSWKGAFYLPAVIAIVVGILFILFAKDTPQSVGLPPIEEYKNDYPEIQVEDREKELSGKE ILFKYVLNNKYLWYIAIANIFVYLVRYGVINWVPTYLKEVKHFNPKDSSLAFALFEYAAIPGTIFVGWLSDKVFNGRRAP VGVFCMIGVTIATYVYWKSNSILAINCALSSIGALIYGPVMLIGVSALDLVPKKAAGTAAGFTGLFGYMGGQVLAEVAMG AVVDKFSWNGGFILLMISSVLAIVFLSFTWNTHDRSEKGPDKVAV
Specific function: Responsible for glycerol-3-phosphate uptake [H]
COG id: COG2271
COG function: function code G; Sugar phosphate permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Organophosphate:Pi antiporter (OPA) (TC 2.A.1.4) family [H]
Homologues:
Organism=Homo sapiens, GI256219598, Length=402, Percent_Identity=29.8507462686567, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI4503847, Length=402, Percent_Identity=29.8507462686567, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI256219483, Length=402, Percent_Identity=29.8507462686567, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI256219543, Length=424, Percent_Identity=29.0094339622642, Blast_Score=169, Evalue=6e-42, Organism=Homo sapiens, GI256219564, Length=333, Percent_Identity=27.3273273273273, Blast_Score=129, Evalue=8e-30, Organism=Homo sapiens, GI38093649, Length=398, Percent_Identity=26.8844221105528, Blast_Score=115, Evalue=8e-26, Organism=Homo sapiens, GI223717983, Length=398, Percent_Identity=26.8844221105528, Blast_Score=115, Evalue=9e-26, Organism=Homo sapiens, GI49619231, Length=406, Percent_Identity=22.6600985221675, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI46361976, Length=397, Percent_Identity=23.9294710327456, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1788573, Length=430, Percent_Identity=57.2093023255814, Blast_Score=503, Evalue=1e-143, Organism=Escherichia coli, GI87082310, Length=433, Percent_Identity=36.7205542725173, Blast_Score=291, Evalue=6e-80, Organism=Escherichia coli, GI2367259, Length=446, Percent_Identity=32.7354260089686, Blast_Score=215, Evalue=4e-57, Organism=Escherichia coli, GI2367379, Length=345, Percent_Identity=24.3478260869565, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI87082320, Length=358, Percent_Identity=22.9050279329609, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1789515, Length=450, Percent_Identity=22.6666666666667, Blast_Score=76, Evalue=6e-15, Organism=Escherichia coli, GI1789152, Length=455, Percent_Identity=23.0769230769231, Blast_Score=69, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17564204, Length=380, Percent_Identity=26.8421052631579, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17564202, Length=443, Percent_Identity=25.9593679458239, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI133901854, Length=475, Percent_Identity=22.3157894736842, Blast_Score=89, Evalue=4e-18, Organism=Caenorhabditis elegans, GI133901856, Length=480, Percent_Identity=22.5, Blast_Score=89, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17542316, Length=492, Percent_Identity=23.5772357723577, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71991453, Length=454, Percent_Identity=21.1453744493392, Blast_Score=75, Evalue=8e-14, Organism=Caenorhabditis elegans, GI71991448, Length=454, Percent_Identity=21.1453744493392, Blast_Score=75, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17540458, Length=284, Percent_Identity=22.887323943662, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24656861, Length=485, Percent_Identity=21.6494845360825, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI24656866, Length=485, Percent_Identity=21.6494845360825, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI45550478, Length=485, Percent_Identity=21.6494845360825, Blast_Score=104, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005267 - InterPro: IPR000849 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR021159 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49433; Mature: 49433
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS50850 MFS ; PS00942 GLPT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKDLFKPASHIERMPKEKIDSAYRRYRIQVFISIYVGYLTYYFVRSNFSLAKVYLIQEG CCHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC FTKTQLGFVASALGLAYGVSKFVMGNLSDRSNPRYFLAAGLILSGIVNLFFPMTKSITAM CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FALMLLNGWFQGMGWPPCGRTMTHWFSDKERGVKMSIWNTAHNVGGGFIATVVLIGVSIF HHHHHHHHHHHCCCCCCCCCHHHHHHCCHHCCCEEEEEHHHHHCCCHHHHHHHHHHHHHH GSWKGAFYLPAVIAIVVGILFILFAKDTPQSVGLPPIEEYKNDYPEIQVEDREKELSGKE CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEECCCHHHCCHHH ILFKYVLNNKYLWYIAIANIFVYLVRYGVINWVPTYLKEVKHFNPKDSSLAFALFEYAAI HHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC PGTIFVGWLSDKVFNGRRAPVGVFCMIGVTIATYVYWKSNSILAINCALSSIGALIYGPV CCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHEEECCCCEEEEEEHHHHHHHHHHHHH MLIGVSALDLVPKKAAGTAAGFTGLFGYMGGQVLAEVAMGAVVDKFSWNGGFILLMISSV HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LAIVFLSFTWNTHDRSEKGPDKVAV HHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLKDLFKPASHIERMPKEKIDSAYRRYRIQVFISIYVGYLTYYFVRSNFSLAKVYLIQEG CCHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC FTKTQLGFVASALGLAYGVSKFVMGNLSDRSNPRYFLAAGLILSGIVNLFFPMTKSITAM CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FALMLLNGWFQGMGWPPCGRTMTHWFSDKERGVKMSIWNTAHNVGGGFIATVVLIGVSIF HHHHHHHHHHHCCCCCCCCCHHHHHHCCHHCCCEEEEEHHHHHCCCHHHHHHHHHHHHHH GSWKGAFYLPAVIAIVVGILFILFAKDTPQSVGLPPIEEYKNDYPEIQVEDREKELSGKE CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEECCCHHHCCHHH ILFKYVLNNKYLWYIAIANIFVYLVRYGVINWVPTYLKEVKHFNPKDSSLAFALFEYAAI HHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC PGTIFVGWLSDKVFNGRRAPVGVFCMIGVTIATYVYWKSNSILAINCALSSIGALIYGPV CCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHEEECCCCEEEEEEHHHHHHHHHHHHH MLIGVSALDLVPKKAAGTAAGFTGLFGYMGGQVLAEVAMGAVVDKFSWNGGFILLMISSV HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LAIVFLSFTWNTHDRSEKGPDKVAV HHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; glycerol-3-phosphate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + glycerol-3-phosphate [Periplasm] = Proton [Cytoplasm] + glycerol-3-phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8012593; 9384377 [H]