Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is nadE [H]
Identifier: 148378539
GI number: 148378539
Start: 634193
End: 636109
Strand: Reverse
Name: nadE [H]
Synonym: CBO0537
Alternate gene names: 148378539
Gene position: 636109-634193 (Counterclockwise)
Preceding gene: 148378545
Following gene: 148378536
Centisome position: 16.37
GC content: 29.94
Gene sequence:
>1917_bases ATGAATAATTCACAATATTACATAAGAGTATCTACTGCTTGTCCTGTAACTAATGTGGCAGATATAGATTTTAATATAGA CAACATAAAAAAGTGTATAGATATATGTATAGAAAAAAAATCAAAATTAATAGTTTTTCCGGAACTTTGTATAACTTCTT ATACTTGTGGAGAACTTTTTTCACAAAGCCTATTAATATCCAAAGCTCTAGATGGAATACATAATATATGTAAATACTCT ATAGATAAAGATGTTTTAATAGCTATAGGATCACCTTTATTATATAAAAATAGTCTTTATAATTGTGCTGTTGTAATATT TGGAGGAAAAATACTAGGTATTGTCCCTAAAAGTTACTTACCTAATTATTCAGAGTTCTATGAGAAAAGATGGTTTACTG AAGGATATAAAATAAAAAGTGAAAGAATTAATTTACCATTCCAAGAGAACATTCCTTTTGGAGTTAACCTTATTTTTTCT GATAAAATTTTCAAATTTGCTTTCGAAGTATGTGAAGATCTTTGGGTTACAATTCCACCTAGTAGTTATCTTGCATTAAT GGGAGCTAATATTATTGGAAATTTATCTGCCTCTAATGAAATAGTTAGTAAATCCGATTATAGACGAAATTTAGTTGCAT CTCAAAGTGGTAGATGCTTAGCATCTTATGTATATTCCTCATCAGGGGTATATGAGTCTTCTACGGATTTAGTATTTAGC GGACACTTATTAATTGGAGAAAATGGCTCTATATTAAAAGAAAACAAAAGATTCCAAAGAGAAAATGAAGTTATTACAAG TATTATAGATATAGATAAAATTAATAGCGAAAGACTTAAAAATGTGAGCTTTACAGATAACTCAATGAATATGAACTTGG AATTAGAAGAAATAACATTTCAATTTGCAATTAACGATGTTGGTGACTTTGATAGACCTATAGACAGATACCCTTTTGTT CCTTCTAATGAAGAAAAAAGAGCAGTAAGATGCAAAGAAATATTTAATATACAAACCTCAGCTCTAGCTAAAAGACTTGA TCATACTAATATGAAAAAAGCAGTTATAGGTATCTCCGGTGGATTAGATTCTACCTTAGCTTTATTAGTTATAGCTAAAA CCTTTGATAAATTAAACATTCCTAGAGAAAACATAATAACTATAACAATGCCTGGTTTTGGAACTACAGATAGAACTTAT AATAATGCTGTAAGTCTATGTAAACACTTAAATACAACCTTAAAAGAAATAAATATAGTAGATGCAGCATTACAACATTT TAAAGATATAGGCCATGACAAGGATATACATGATGTTACCTATGAAAATGTTCAAGCAAGAGAGAGAACTCAAATACTTA TGGATATAGCCAATAAAGAAGGTGGCTTAGTTATAGGAACCGGTGATTTATCTGAATTAGCTTTAGGCTGGTGTACATAT AATGGAGATCATATGTCCATGTACAGCGTAAATTGCTCTATTCCTAAGACCTTAGTAAGATATCTGGTGAGATATGTAGC TGAAAATGAAGTAGCAAAAGAAATATCAGAAATACTTATAGATATTTTAGATACACCTGTAAGTCCTGAACTGTTACCAA AGGATAAAGAGGGCAACATTGTTCAAAAAACTGAAGATATAGTAGGACCTTATGAGTTGCATGATTTCTTTCTTTATTAT TTTATTCGTCAAGGAGCTACTCCAGATAAAATAAAACAATTAGCTAAAATAGCTTTTAAAGATTCCTATGATAAAGAAAC TATTGACAAATGGTTCTCTTATTTTATAAGAAGATTCTTTACCCAACAATTTAAACGTTCCGCAGTACCAGACGGTCCTA AAGTTGGAACTATAAGTTTATCCCCTAGAGGAGATTGGAGAATGCCATCAGACGCAAGTTTTAACCTTTGGAAATAA
Upstream 100 bases:
>100_bases TTGCATAATTTTTTTATTAATATTTTATATTAAAGTTTAATTATTTACCTTTAATTTGATATAATCATAGGGTAATCATA TTTTAAATGGAGGATTTTAT
Downstream 100 bases:
>100_bases AAAAACAAAATAACATAATATATTTACTTTTGAAATTTAATAACGTGTCTCAAAATAAATTTAATTTTGAGACACTATCT ATTTTTATAACTATCCTAAA
Product: NAD synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolyzing] [H]
Number of amino acids: Translated: 638; Mature: 638
Protein sequence:
>638_residues MNNSQYYIRVSTACPVTNVADIDFNIDNIKKCIDICIEKKSKLIVFPELCITSYTCGELFSQSLLISKALDGIHNICKYS IDKDVLIAIGSPLLYKNSLYNCAVVIFGGKILGIVPKSYLPNYSEFYEKRWFTEGYKIKSERINLPFQENIPFGVNLIFS DKIFKFAFEVCEDLWVTIPPSSYLALMGANIIGNLSASNEIVSKSDYRRNLVASQSGRCLASYVYSSSGVYESSTDLVFS GHLLIGENGSILKENKRFQRENEVITSIIDIDKINSERLKNVSFTDNSMNMNLELEEITFQFAINDVGDFDRPIDRYPFV PSNEEKRAVRCKEIFNIQTSALAKRLDHTNMKKAVIGISGGLDSTLALLVIAKTFDKLNIPRENIITITMPGFGTTDRTY NNAVSLCKHLNTTLKEINIVDAALQHFKDIGHDKDIHDVTYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCTY NGDHMSMYSVNCSIPKTLVRYLVRYVAENEVAKEISEILIDILDTPVSPELLPKDKEGNIVQKTEDIVGPYELHDFFLYY FIRQGATPDKIKQLAKIAFKDSYDKETIDKWFSYFIRRFFTQQFKRSAVPDGPKVGTISLSPRGDWRMPSDASFNLWK
Sequences:
>Translated_638_residues MNNSQYYIRVSTACPVTNVADIDFNIDNIKKCIDICIEKKSKLIVFPELCITSYTCGELFSQSLLISKALDGIHNICKYS IDKDVLIAIGSPLLYKNSLYNCAVVIFGGKILGIVPKSYLPNYSEFYEKRWFTEGYKIKSERINLPFQENIPFGVNLIFS DKIFKFAFEVCEDLWVTIPPSSYLALMGANIIGNLSASNEIVSKSDYRRNLVASQSGRCLASYVYSSSGVYESSTDLVFS GHLLIGENGSILKENKRFQRENEVITSIIDIDKINSERLKNVSFTDNSMNMNLELEEITFQFAINDVGDFDRPIDRYPFV PSNEEKRAVRCKEIFNIQTSALAKRLDHTNMKKAVIGISGGLDSTLALLVIAKTFDKLNIPRENIITITMPGFGTTDRTY NNAVSLCKHLNTTLKEINIVDAALQHFKDIGHDKDIHDVTYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCTY NGDHMSMYSVNCSIPKTLVRYLVRYVAENEVAKEISEILIDILDTPVSPELLPKDKEGNIVQKTEDIVGPYELHDFFLYY FIRQGATPDKIKQLAKIAFKDSYDKETIDKWFSYFIRRFFTQQFKRSAVPDGPKVGTISLSPRGDWRMPSDASFNLWK >Mature_638_residues MNNSQYYIRVSTACPVTNVADIDFNIDNIKKCIDICIEKKSKLIVFPELCITSYTCGELFSQSLLISKALDGIHNICKYS IDKDVLIAIGSPLLYKNSLYNCAVVIFGGKILGIVPKSYLPNYSEFYEKRWFTEGYKIKSERINLPFQENIPFGVNLIFS DKIFKFAFEVCEDLWVTIPPSSYLALMGANIIGNLSASNEIVSKSDYRRNLVASQSGRCLASYVYSSSGVYESSTDLVFS GHLLIGENGSILKENKRFQRENEVITSIIDIDKINSERLKNVSFTDNSMNMNLELEEITFQFAINDVGDFDRPIDRYPFV PSNEEKRAVRCKEIFNIQTSALAKRLDHTNMKKAVIGISGGLDSTLALLVIAKTFDKLNIPRENIITITMPGFGTTDRTY NNAVSLCKHLNTTLKEINIVDAALQHFKDIGHDKDIHDVTYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCTY NGDHMSMYSVNCSIPKTLVRYLVRYVAENEVAKEISEILIDILDTPVSPELLPKDKEGNIVQKTEDIVGPYELHDFFLYY FIRQGATPDKIKQLAKIAFKDSYDKETIDKWFSYFIRRFFTQQFKRSAVPDGPKVGTISLSPRGDWRMPSDASFNLWK
Specific function: Can use both glutamine or ammonia as a nitrogen source [H]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI41393551, Length=603, Percent_Identity=23.0514096185738, Blast_Score=124, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17538756, Length=612, Percent_Identity=23.0392156862745, Blast_Score=116, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6321865, Length=614, Percent_Identity=25.5700325732899, Blast_Score=119, Evalue=1e-27, Organism=Drosophila melanogaster, GI24641841, Length=609, Percent_Identity=21.5106732348112, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI24641843, Length=609, Percent_Identity=21.5106732348112, Blast_Score=108, Evalue=1e-23,
Paralogues:
None
Copy number: 100 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 72295; Mature: 72295
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNSQYYIRVSTACPVTNVADIDFNIDNIKKCIDICIEKKSKLIVFPELCITSYTCGELF CCCCEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHCCCCCEEEEHHHHHCCCHHHHHH SQSLLISKALDGIHNICKYSIDKDVLIAIGSPLLYKNSLYNCAVVIFGGKILGIVPKSYL HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHCCCCCCEEEEEEECCEEEEECCHHHC PNYSEFYEKRWFTEGYKIKSERINLPFQENIPFGVNLIFSDKIFKFAFEVCEDLWVTIPP CCHHHHHHHHHCCCCEEEECCEECCCHHCCCCCCEEEEECHHHHHHHHHHHHHCEEECCC SSYLALMGANIIGNLSASNEIVSKSDYRRNLVASQSGRCLASYVYSSSGVYESSTDLVFS HHHHHHHCCHHHCCCCCCCCHHCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEEE GHLLIGENGSILKENKRFQRENEVITSIIDIDKINSERLKNVSFTDNSMNMNLELEEITF EEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEECCCCCEEEEEEHHEEE QFAINDVGDFDRPIDRYPFVPSNEEKRAVRCKEIFNIQTSALAKRLDHTNMKKAVIGISG EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEECC GLDSTLALLVIAKTFDKLNIPRENIITITMPGFGTTDRTYNNAVSLCKHLNTTLKEINIV CCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH DAALQHFKDIGHDKDIHDVTYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCTY HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHEEEEEE NGDHMSMYSVNCSIPKTLVRYLVRYVAENEVAKEISEILIDILDTPVSPELLPKDKEGNI CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE VQKTEDIVGPYELHDFFLYYFIRQGATPDKIKQLAKIAFKDSYDKETIDKWFSYFIRRFF EEHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH TQQFKRSAVPDGPKVGTISLSPRGDWRMPSDASFNLWK HHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNNSQYYIRVSTACPVTNVADIDFNIDNIKKCIDICIEKKSKLIVFPELCITSYTCGELF CCCCEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHCCCCCEEEEHHHHHCCCHHHHHH SQSLLISKALDGIHNICKYSIDKDVLIAIGSPLLYKNSLYNCAVVIFGGKILGIVPKSYL HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHCCCCCCEEEEEEECCEEEEECCHHHC PNYSEFYEKRWFTEGYKIKSERINLPFQENIPFGVNLIFSDKIFKFAFEVCEDLWVTIPP CCHHHHHHHHHCCCCEEEECCEECCCHHCCCCCCEEEEECHHHHHHHHHHHHHCEEECCC SSYLALMGANIIGNLSASNEIVSKSDYRRNLVASQSGRCLASYVYSSSGVYESSTDLVFS HHHHHHHCCHHHCCCCCCCCHHCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEEE GHLLIGENGSILKENKRFQRENEVITSIIDIDKINSERLKNVSFTDNSMNMNLELEEITF EEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEECCCCCEEEEEEHHEEE QFAINDVGDFDRPIDRYPFVPSNEEKRAVRCKEIFNIQTSALAKRLDHTNMKKAVIGISG EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEECC GLDSTLALLVIAKTFDKLNIPRENIITITMPGFGTTDRTYNNAVSLCKHLNTTLKEINIV CCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH DAALQHFKDIGHDKDIHDVTYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCTY HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHEEEEEE NGDHMSMYSVNCSIPKTLVRYLVRYVAENEVAKEISEILIDILDTPVSPELLPKDKEGNI CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE VQKTEDIVGPYELHDFFLYYFIRQGATPDKIKQLAKIAFKDSYDKETIDKWFSYFIRRFF EEHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH TQQFKRSAVPDGPKVGTISLSPRGDWRMPSDASFNLWK HHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]