Click here to switch to the map view.

The map label for this gene is 148361206

Identifier: 148361206

GI number: 148361206

Start: 3443685

End: 3443924

Strand: Reverse

Name: 148361206

Synonym: LPC_3180

Alternate gene names: NA

Gene position: 3443924-3443685 (Counterclockwise)

Preceding gene: 148361207

Following gene: 148361198

Centisome position: 96.29

GC content: 43.75

Gene sequence:

>240_bases
ATGCTTGATGGCTCGATTATAAAAGTGCATCAAGATGCAATGAGAAGCAGCTACGATAGAAGTGCAGAGGCAATTGGCTC
TAGCGTTGGTGGGCTTAGCACAAAAATTCATGCCAAAGTTGACTCATTGGGTCAACTCGTCAATATACTGATAACACCTG
GACAAGTACATGAGAGTCAAGTGGCTCATGAAGTTTGGGCGCATGAGTCTTGTGAGTTCTTTTTGGCAGATAAGGCTTAG

Upstream 100 bases:

>100_bases
AGGAAAAGTGTTTATAATCGTTATAATAACTGGTCGAAAAAAGGTTATATCACCGCAATATTGACGGAATTAAAAAAAAG
ATGGCGATCACGAATGGCAC

Downstream 100 bases:

>100_bases
GATATTGATGGTTTTCGAAAAGCATTAACCGATGATGGGATAAGAACTGTTATCCCAAGCAAAAAGAATTGCTTGAATCC
AACGAACCACGATTGTTATA

Product: ISSod6 transposase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MLDGSIIKVHQDAMRSSYDRSAEAIGSSVGGLSTKIHAKVDSLGQLVNILITPGQVHESQVAHEVWAHESCEFFLADKA

Sequences:

>Translated_79_residues
MLDGSIIKVHQDAMRSSYDRSAEAIGSSVGGLSTKIHAKVDSLGQLVNILITPGQVHESQVAHEVWAHESCEFFLADKA
>Mature_79_residues
MLDGSIIKVHQDAMRSSYDRSAEAIGSSVGGLSTKIHAKVDSLGQLVNILITPGQVHESQVAHEVWAHESCEFFLADKA

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8519; Mature: 8519

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDGSIIKVHQDAMRSSYDRSAEAIGSSVGGLSTKIHAKVDSLGQLVNILITPGQVHESQ
CCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH
VAHEVWAHESCEFFLADKA
HHHHHHHCCCCEEEEECCC
>Mature Secondary Structure
MLDGSIIKVHQDAMRSSYDRSAEAIGSSVGGLSTKIHAKVDSLGQLVNILITPGQVHESQ
CCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH
VAHEVWAHESCEFFLADKA
HHHHHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA