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The map label for this gene is ywhC [H]

Identifier: 148360433

GI number: 148360433

Start: 1099230

End: 1099889

Strand: Reverse

Name: ywhC [H]

Synonym: LPC_2372

Alternate gene names: 148360433

Gene position: 1099889-1099230 (Counterclockwise)

Preceding gene: 148360427

Following gene: 148360434

Centisome position: 30.75

GC content: 36.82

Gene sequence:

>660_bases
ATGCCAGAATTCACGTTAATCCAACAAATTTGTATTTGGGCTTTACCAGTATTATTAGCTATTACTTTTCATGAGTTAGC
TCATGGTTACGTTGCCTACCGCTGCGGTGACAACACAGCTAAAATGTTCGGTCGATTAACATTAAACCCTATCAAACACA
TTGATCCAATAGGCACTGTTCTATTACCTCTTTTAATTGGCGTGATAACAAATTTCAATTTCGTAATTGGTTACGCAAAA
CCGGTTCCGGTTAACCAGAGCCAACTGCGAAAACCACGCCGAGATATGATATTGGTAACGCTTGCGGGACCATTAGCAAA
TCTGATAATGGCATTCCTATGGGCTGGATGTTTTAAAATTGCAACTTTCTTAAATCCTCAAAGCTCAATGGCTGCTTTAT
TCCTGCTTGTTACAGCCAGAGCGGGAATGATGATCAATTTGATTCTTGCCTTTTTAAACTTAATCCCCATTCCGCCACTT
GATGGCAGCAAAGTTGTAATAAATCTATTGCCAGCAAGACAAGCTATCGCTTATGCAAAATTAGAACCATTTGGTTTTTT
AATATTGATTGTATTAATTTTTACTAATGTATTGGGATATATTCTTACTCCCCTCATCTATGGTTCATTATATATTTTAA
GCGCGATTTTTAATTTATGA

Upstream 100 bases:

>100_bases
TCAACAAATGCGAGCGGCCACACAATTTTTCATCAACCCTTGTTATTAGCGAGTAGAATTCGTTAAAATCAGGATCCTTA
TTAAATACATCAGAATATTA

Downstream 100 bases:

>100_bases
ATATTTTAGCAGATGCTTTATTGCCAGGATTGGATAGTGCTTTTCCACCACCATTTACCGTAACCTTGTATCATAAGGCC
GATGAAATTCCAGAATTGCT

Product: Zn-dependent protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MPEFTLIQQICIWALPVLLAITFHELAHGYVAYRCGDNTAKMFGRLTLNPIKHIDPIGTVLLPLLIGVITNFNFVIGYAK
PVPVNQSQLRKPRRDMILVTLAGPLANLIMAFLWAGCFKIATFLNPQSSMAALFLLVTARAGMMINLILAFLNLIPIPPL
DGSKVVINLLPARQAIAYAKLEPFGFLILIVLIFTNVLGYILTPLIYGSLYILSAIFNL

Sequences:

>Translated_219_residues
MPEFTLIQQICIWALPVLLAITFHELAHGYVAYRCGDNTAKMFGRLTLNPIKHIDPIGTVLLPLLIGVITNFNFVIGYAK
PVPVNQSQLRKPRRDMILVTLAGPLANLIMAFLWAGCFKIATFLNPQSSMAALFLLVTARAGMMINLILAFLNLIPIPPL
DGSKVVINLLPARQAIAYAKLEPFGFLILIVLIFTNVLGYILTPLIYGSLYILSAIFNL
>Mature_218_residues
PEFTLIQQICIWALPVLLAITFHELAHGYVAYRCGDNTAKMFGRLTLNPIKHIDPIGTVLLPLLIGVITNFNFVIGYAKP
VPVNQSQLRKPRRDMILVTLAGPLANLIMAFLWAGCFKIATFLNPQSSMAALFLLVTARAGMMINLILAFLNLIPIPPLD
GSKVVINLLPARQAIAYAKLEPFGFLILIVLIFTNVLGYILTPLIYGSLYILSAIFNL

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 24163; Mature: 24032

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEFTLIQQICIWALPVLLAITFHELAHGYVAYRCGDNTAKMFGRLTLNPIKHIDPIGTV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCHHHHCCHHHHH
LLPLLIGVITNFNFVIGYAKPVPVNQSQLRKPRRDMILVTLAGPLANLIMAFLWAGCFKI
HHHHHHHHHCCCCEEEEECCCCCCCHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHH
ATFLNPQSSMAALFLLVTARAGMMINLILAFLNLIPIPPLDGSKVVINLLPARQAIAYAK
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHH
LEPFGFLILIVLIFTNVLGYILTPLIYGSLYILSAIFNL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PEFTLIQQICIWALPVLLAITFHELAHGYVAYRCGDNTAKMFGRLTLNPIKHIDPIGTV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCHHHHCCHHHHH
LLPLLIGVITNFNFVIGYAKPVPVNQSQLRKPRRDMILVTLAGPLANLIMAFLWAGCFKI
HHHHHHHHHCCCCEEEEECCCCCCCHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHH
ATFLNPQSSMAALFLLVTARAGMMINLILAFLNLIPIPPLDGSKVVINLLPARQAIAYAK
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHH
LEPFGFLILIVLIFTNVLGYILTPLIYGSLYILSAIFNL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]