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The map label for this gene is cecC

Identifier: 148360314

GI number: 148360314

Start: 1233883

End: 1235181

Strand: Direct

Name: cecC

Synonym: LPC_2251

Alternate gene names: NA

Gene position: 1233883-1235181 (Clockwise)

Preceding gene: 148360315

Following gene: 148360313

Centisome position: 34.5

GC content: 43.34

Gene sequence:

>1299_bases
ATGAGGTGGTTTTTTTGCTGGATGATGTTTCTGTTACTGTGTTCCTCTCTGGCTACAGCAGGCAACGTATTAACCCTTCA
AGAAATAACCCAAATTGCTCTAGCGAACAACAAGGATTTAAAAGCAGCCCGTTATACTGTGGCTATTGCCAAGGCGCGTT
TAATCCAAGCAGGTCTTTGGCCTAATCCAAGTCTTAATCTTTCCAATAACGACGATCGCTTATTTAATGACGAAGGGGAA
TATTCACGCAGTGCTGGTTTTAGCCAAGCATTCCCTATCTCTGGGCGTATTGCAAAACAAAAGACCGTGGCGCGCTTGGA
TGTGTTAAAAGCCATGGCAGAAATTAGGGAAGCGGAGCGTCAATTAAGCAGCAAAGTGGCCAATGCGTATTATGCTGCGG
TGATTACCGAGCGTCGCCTGCAACAGGTGAATTACTTATTACGGATAAACCACGAGCTTGTCGATGTGATTCACAACCGT
TATCATGCGGCTGAAATTTCAAAGCTGGATGAGAATGCAGCACGCATTGAGTATCTGCGGATTGGGCAAGAAAAACATCT
TTTGCATAGTTTTAGTATCAGTCAATATGCCCTACTGAATCAATTGATGGGGCGGGAAGCCAATTCTCCTTTATCTCTTA
AGAGGGATGTCATCGCAGGTAAAAAACTTTCTGAGTTAGCCTTCTTAAAAACATTAGCCCTTAAAAATCGTCCTGATCGT
CAGGCCATCGCCTTATCGATTCACCGCGCCAATGCCGACAGGCGTTTGGCCAAAGCCGAGCGTTTTGCGGATTGGACGGT
AGGGCTTGGTGTTCAACAAGATAAAATTGTGGTGGAAGAGGGGCCACCCCAACCCGCTGATCGCACTTTGGGGATCACAC
TTTCCGTTCCTCTTCCTCTTTTAAACCGTAATCAGGGACGAATTTTAGAAGCCAGTCACACAGGAACTCAAGCCATGATG
GCATTACGTGCCTTGGATTTAGTTATTGAAACTGAAATAGCGAGTAATTATGCCCAACTGAAAGCACTTCAAATGAGCCT
TAGAGAAACGCAGACTGTTTCTCTTAAATTAGCAGTTGAGAATGTCAAATTGGCACGTGATTCTTATGAGAGCGGACAAA
TTTCTTTTTTGAATGTATTGCAAGTGCAAAAACAACAAAATGATTTGCAAACAACTTATCTCAATACTTTAGAAAAGTAT
TTGCAAGTGTATGTGGCTTTATGTACGGCGATTGGTCCTGGTAAAACCAATGGGTTTTGCCCTTATTTAGCGTATCAAAG
GAATGGGGATAGTAAATGA

Upstream 100 bases:

>100_bases
AAATGATTTCGTAGCAGACCATTGGATGGTCGGTCGAGCGTACCGATGTAAGACGAATTAATAGTTATTTTGAGTCTTAT
TATTTATGGAAAATAATTCT

Downstream 100 bases:

>100_bases
GATGGTGGCAGCAAATGAGAAGGATGGCATTAATTAGTCTGTTTCTTAGTTTACTCTTTCCTATTCAAGGGTGCTTTGCC
CATGGAGAAGAAATTGAAGT

Product: chemiosmotic efflux system C protein C

Products: NA

Alternate protein names: Metal Ion Efflux Outer Membrane Protein Family Protein; Chemiosmotic Efflux System C Protein C; Metal Transporter-Like Exported Protein; Efflux Transporter Outer Membrane Factor Family; Chemiosmotic Efflux System Protein C; Outer Membrane Protein lC; RND Heavy Metal Ion Efflux Pump Outer Membrane Protein; Cobalt-Zinc-Cadmium Resistance Protein; Heavy Metal Resistance Protein CzcC; Cobalt-Zinc-Cadmium Resistance Protein CzcC; RND Family Metal Ion Efflux Pump Outer Membrane Protein; HelC Protein

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MRWFFCWMMFLLLCSSLATAGNVLTLQEITQIALANNKDLKAARYTVAIAKARLIQAGLWPNPSLNLSNNDDRLFNDEGE
YSRSAGFSQAFPISGRIAKQKTVARLDVLKAMAEIREAERQLSSKVANAYYAAVITERRLQQVNYLLRINHELVDVIHNR
YHAAEISKLDENAARIEYLRIGQEKHLLHSFSISQYALLNQLMGREANSPLSLKRDVIAGKKLSELAFLKTLALKNRPDR
QAIALSIHRANADRRLAKAERFADWTVGLGVQQDKIVVEEGPPQPADRTLGITLSVPLPLLNRNQGRILEASHTGTQAMM
ALRALDLVIETEIASNYAQLKALQMSLRETQTVSLKLAVENVKLARDSYESGQISFLNVLQVQKQQNDLQTTYLNTLEKY
LQVYVALCTAIGPGKTNGFCPYLAYQRNGDSK

Sequences:

>Translated_432_residues
MRWFFCWMMFLLLCSSLATAGNVLTLQEITQIALANNKDLKAARYTVAIAKARLIQAGLWPNPSLNLSNNDDRLFNDEGE
YSRSAGFSQAFPISGRIAKQKTVARLDVLKAMAEIREAERQLSSKVANAYYAAVITERRLQQVNYLLRINHELVDVIHNR
YHAAEISKLDENAARIEYLRIGQEKHLLHSFSISQYALLNQLMGREANSPLSLKRDVIAGKKLSELAFLKTLALKNRPDR
QAIALSIHRANADRRLAKAERFADWTVGLGVQQDKIVVEEGPPQPADRTLGITLSVPLPLLNRNQGRILEASHTGTQAMM
ALRALDLVIETEIASNYAQLKALQMSLRETQTVSLKLAVENVKLARDSYESGQISFLNVLQVQKQQNDLQTTYLNTLEKY
LQVYVALCTAIGPGKTNGFCPYLAYQRNGDSK
>Mature_432_residues
MRWFFCWMMFLLLCSSLATAGNVLTLQEITQIALANNKDLKAARYTVAIAKARLIQAGLWPNPSLNLSNNDDRLFNDEGE
YSRSAGFSQAFPISGRIAKQKTVARLDVLKAMAEIREAERQLSSKVANAYYAAVITERRLQQVNYLLRINHELVDVIHNR
YHAAEISKLDENAARIEYLRIGQEKHLLHSFSISQYALLNQLMGREANSPLSLKRDVIAGKKLSELAFLKTLALKNRPDR
QAIALSIHRANADRRLAKAERFADWTVGLGVQQDKIVVEEGPPQPADRTLGITLSVPLPLLNRNQGRILEASHTGTQAMM
ALRALDLVIETEIASNYAQLKALQMSLRETQTVSLKLAVENVKLARDSYESGQISFLNVLQVQKQQNDLQTTYLNTLEKY
LQVYVALCTAIGPGKTNGFCPYLAYQRNGDSK

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48457; Mature: 48457

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWFFCWMMFLLLCSSLATAGNVLTLQEITQIALANNKDLKAARYTVAIAKARLIQAGLW
CHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
PNPSLNLSNNDDRLFNDEGEYSRSAGFSQAFPISGRIAKQKTVARLDVLKAMAEIREAER
CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QLSSKVANAYYAAVITERRLQQVNYLLRINHELVDVIHNRYHAAEISKLDENAARIEYLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
IGQEKHLLHSFSISQYALLNQLMGREANSPLSLKRDVIAGKKLSELAFLKTLALKNRPDR
CCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
QAIALSIHRANADRRLAKAERFADWTVGLGVQQDKIVVEEGPPQPADRTLGITLSVPLPL
CEEEEEEECCCCHHHHHHHHHHCCHHCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCC
LNRNQGRILEASHTGTQAMMALRALDLVIETEIASNYAQLKALQMSLRETQTVSLKLAVE
CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEE
NVKLARDSYESGQISFLNVLQVQKQQNDLQTTYLNTLEKYLQVYVALCTAIGPGKTNGFC
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PYLAYQRNGDSK
CEEEEECCCCCC
>Mature Secondary Structure
MRWFFCWMMFLLLCSSLATAGNVLTLQEITQIALANNKDLKAARYTVAIAKARLIQAGLW
CHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
PNPSLNLSNNDDRLFNDEGEYSRSAGFSQAFPISGRIAKQKTVARLDVLKAMAEIREAER
CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QLSSKVANAYYAAVITERRLQQVNYLLRINHELVDVIHNRYHAAEISKLDENAARIEYLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
IGQEKHLLHSFSISQYALLNQLMGREANSPLSLKRDVIAGKKLSELAFLKTLALKNRPDR
CCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
QAIALSIHRANADRRLAKAERFADWTVGLGVQQDKIVVEEGPPQPADRTLGITLSVPLPL
CEEEEEEECCCCHHHHHHHHHHCCHHCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCC
LNRNQGRILEASHTGTQAMMALRALDLVIETEIASNYAQLKALQMSLRETQTVSLKLAVE
CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEE
NVKLARDSYESGQISFLNVLQVQKQQNDLQTTYLNTLEKYLQVYVALCTAIGPGKTNGFC
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PYLAYQRNGDSK
CEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA