Click here to switch to the map view.

The map label for this gene is atpF2 [H]

Identifier: 148360287

GI number: 148360287

Start: 1264778

End: 1265521

Strand: Reverse

Name: atpF2 [H]

Synonym: LPC_2224

Alternate gene names: 148360287

Gene position: 1265521-1264778 (Counterclockwise)

Preceding gene: 148360286

Following gene: 148360288

Centisome position: 35.38

GC content: 39.92

Gene sequence:

>744_bases
ATGGAACTCTCTTGGACCACTTTTTCATTAGAACTCATTAATTTTCTTATTCTCATTTGGATTTTGAAACGCTTTCTTTA
TGCGCCTATACAAAAAACCATATTGGAACGAAAAAAAAGAGTGCAAGAACAATTAGAGACTGCACAAACACTGCACAGGC
AAGCAACGCAATTGCAAACAACCTATCAAAATCGTCTTGCCGATTGGCAACAAGAGAAAGCGACCCTACAAAACGAGTGG
CATGAGGCGATGGAACGATGGAAATCAGAAGAAAGACTCCGGTTTGAAAAACAATTGCGTCAAGAAAAAGAGCAGATTTT
TTCCCATGAAATGCAAAAAGCCGCCGCCGTCATTGAAAACAATGCCAAGGAAGCGTTTTTATTGGCTGGGAAATTTGCTG
AACAATTGTTAATGCCTTTTGCGGATGCCCATCTTGAAGAGAAAATCATTAAAAAAACCATTGAGGATCTGAATCATTTT
CCGGTAGAGCAATGGCAATGGCTCAATACTGTGCCCGAAGAAGAAACCATTTCGATACAAACGGCCTACCCCATCCAAGA
ACATCAGAAACAGGATCTCTTGCACGTCATTGAACAATTGTCACCTAAAAAACTTACAGTCTCTTTTACGGAAAATCCAA
AGCTTCTCGCGGGATTAACCCTTCAAATGGGCCCCATGTGCTTGCAAGCCAATCTTCGTGATGAATTAAAATTCTTTACA
GAGACAAAAAATGAATTGGTCTAA

Upstream 100 bases:

>100_bases
TGATCGAATCGTTAGCCATTTATTGTTTGGTGATTGTTTTGATTATCCTCTTTAGAAATCCATTATTGTCTTATTTTGTA
ACGCAACAGGGATAAAACCA

Downstream 100 bases:

>100_bases
CACCCCTTCTTTTCTTGAGAAGCAACGACAGCGCCTTAAGCGCTATCAATTTCAAATCAAGGTATCCGAACAAGGACGGG
TGGTTTCTGTTGGAGATGGT

Product: hypothetical protein

Products: NA

Alternate protein names: ATP synthase F(0) sector subunit b 2; ATPase subunit I 2; F-type ATPase subunit b 2; F-ATPase subunit b 2 [H]

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MELSWTTFSLELINFLILIWILKRFLYAPIQKTILERKKRVQEQLETAQTLHRQATQLQTTYQNRLADWQQEKATLQNEW
HEAMERWKSEERLRFEKQLRQEKEQIFSHEMQKAAAVIENNAKEAFLLAGKFAEQLLMPFADAHLEEKIIKKTIEDLNHF
PVEQWQWLNTVPEEETISIQTAYPIQEHQKQDLLHVIEQLSPKKLTVSFTENPKLLAGLTLQMGPMCLQANLRDELKFFT
ETKNELV

Sequences:

>Translated_247_residues
MELSWTTFSLELINFLILIWILKRFLYAPIQKTILERKKRVQEQLETAQTLHRQATQLQTTYQNRLADWQQEKATLQNEW
HEAMERWKSEERLRFEKQLRQEKEQIFSHEMQKAAAVIENNAKEAFLLAGKFAEQLLMPFADAHLEEKIIKKTIEDLNHF
PVEQWQWLNTVPEEETISIQTAYPIQEHQKQDLLHVIEQLSPKKLTVSFTENPKLLAGLTLQMGPMCLQANLRDELKFFT
ETKNELV
>Mature_247_residues
MELSWTTFSLELINFLILIWILKRFLYAPIQKTILERKKRVQEQLETAQTLHRQATQLQTTYQNRLADWQQEKATLQNEW
HEAMERWKSEERLRFEKQLRQEKEQIFSHEMQKAAAVIENNAKEAFLLAGKFAEQLLMPFADAHLEEKIIKKTIEDLNHF
PVEQWQWLNTVPEEETISIQTAYPIQEHQKQDLLHVIEQLSPKKLTVSFTENPKLLAGLTLQMGPMCLQANLRDELKFFT
ETKNELV

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) [H]

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002146
- InterPro:   IPR000711 [H]

Pfam domain/function: PF00430 ATP-synt_B; PF00213 OSCP [H]

EC number: NA

Molecular weight: Translated: 29371; Mature: 29371

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELSWTTFSLELINFLILIWILKRFLYAPIQKTILERKKRVQEQLETAQTLHRQATQLQT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYQNRLADWQQEKATLQNEWHEAMERWKSEERLRFEKQLRQEKEQIFSHEMQKAAAVIEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NAKEAFLLAGKFAEQLLMPFADAHLEEKIIKKTIEDLNHFPVEQWQWLNTVPEEETISIQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEE
TAYPIQEHQKQDLLHVIEQLSPKKLTVSFTENPKLLAGLTLQMGPMCLQANLRDELKFFT
ECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
ETKNELV
HHHHCCC
>Mature Secondary Structure
MELSWTTFSLELINFLILIWILKRFLYAPIQKTILERKKRVQEQLETAQTLHRQATQLQT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYQNRLADWQQEKATLQNEWHEAMERWKSEERLRFEKQLRQEKEQIFSHEMQKAAAVIEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NAKEAFLLAGKFAEQLLMPFADAHLEEKIIKKTIEDLNHFPVEQWQWLNTVPEEETISIQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEE
TAYPIQEHQKQDLLHVIEQLSPKKLTVSFTENPKLLAGLTLQMGPMCLQANLRDELKFFT
ECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
ETKNELV
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA