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The map label for this gene is 148359694

Identifier: 148359694

GI number: 148359694

Start: 2521705

End: 2522064

Strand: Direct

Name: 148359694

Synonym: LPC_1615

Alternate gene names: NA

Gene position: 2521705-2522064 (Clockwise)

Preceding gene: 148359693

Following gene: 148359695

Centisome position: 70.51

GC content: 36.39

Gene sequence:

>360_bases
ATGAAGCAGCAAATTAAAGCCAGGTTAACTTGGGTAAATCTATATCTTGAAACTAAAGATGCAGGATATGTTTGCCATAA
ATGTGGTATTTCTCGTCCTACCCTGAGAAAGTGGTACAGACGTTATTTAGAAGCGGGTATGGATGGATTAAATGATCAAA
GCAAAAAGCCTCATTTGTCACCAAGTAAGAAGTTAAATTCAGAGCTGATTAAACTAATTCTTGATTTGCGTATAAGTCGT
AATCTGGACGCCAGACGTATCCAAACTGAATTGATTAGATTGCACAACTGTCCGCTTTCTTTAGCGAGTATCCATAAAGC
GTTAACTAGCAACCAAACACAACCAATAAAAAAAACTTAA

Upstream 100 bases:

>100_bases
AAATCAGAAGCATTAACCCAATTAAAATCGGGCCAATCATTGACAGGCAATGTGTGATTCATAGACATCGTTTCAATAAG
TTGATAGATTTACCCGCCTT

Downstream 100 bases:

>100_bases
GCGGAAAAAGAAATTTAAGCGCTATAGTCGTCCTATTCCTGGTGAGCGTATCCAAATGGATACCTGCAAAATAGCACCAG
GAATTTATCAATATACTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Catalytic Subunit; Integrase Catalytic Region

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKQQIKARLTWVNLYLETKDAGYVCHKCGISRPTLRKWYRRYLEAGMDGLNDQSKKPHLSPSKKLNSELIKLILDLRISR
NLDARRIQTELIRLHNCPLSLASIHKALTSNQTQPIKKT

Sequences:

>Translated_119_residues
MKQQIKARLTWVNLYLETKDAGYVCHKCGISRPTLRKWYRRYLEAGMDGLNDQSKKPHLSPSKKLNSELIKLILDLRISR
NLDARRIQTELIRLHNCPLSLASIHKALTSNQTQPIKKT
>Mature_119_residues
MKQQIKARLTWVNLYLETKDAGYVCHKCGISRPTLRKWYRRYLEAGMDGLNDQSKKPHLSPSKKLNSELIKLILDLRISR
NLDARRIQTELIRLHNCPLSLASIHKALTSNQTQPIKKT

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13822; Mature: 13822

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQQIKARLTWVNLYLETKDAGYVCHKCGISRPTLRKWYRRYLEAGMDGLNDQSKKPHLS
CCCHHHHHEEEEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PSKKLNSELIKLILDLRISRNLDARRIQTELIRLHNCPLSLASIHKALTSNQTQPIKKT
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKQQIKARLTWVNLYLETKDAGYVCHKCGISRPTLRKWYRRYLEAGMDGLNDQSKKPHLS
CCCHHHHHEEEEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PSKKLNSELIKLILDLRISRNLDARRIQTELIRLHNCPLSLASIHKALTSNQTQPIKKT
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA