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The map label for this gene is 148359688

Identifier: 148359688

GI number: 148359688

Start: 2502499

End: 2503290

Strand: Direct

Name: 148359688

Synonym: LPC_1607

Alternate gene names: NA

Gene position: 2502499-2503290 (Clockwise)

Preceding gene: 148359686

Following gene: 148359691

Centisome position: 69.97

GC content: 37.37

Gene sequence:

>792_bases
ATGGCAAAACGCTATGAAAAACGAATCGATTGGCAGCGAATATATCACAAATATCGGCGCTCTAATGTAAAGAAAAGAAG
TCTATTATTGAATGAACTATGCGATTTGACTGGGATGAATCGCAAGTATTTAATTCGAAAGCTGAATAAAAAGAAAGTTA
AGTCTTCTAAACATCGAGGAGCAAAACCGACGTATGAAGCAGAAATTTATTTATCGATTATAAAACCCATCTGGTTAGCG
GCAGATCAAATTCGCGGTAAACGTTTGAAAGAAGTTTTGCAAGATTGTCTTCACTTTTATGAAGAAGAGTTTGGCGACCT
AGACGAGATTATCAGGTTTAAGGTTAAACAAATAAGCTCAGCCACATTAGACAGGCTATTAAAGCCACTCAAGGCGAATT
ACAAAGGACGAGGGATATCTGGCACAAAACCCGGCACTATTATTAAGAATCAGATTCCAATTAAAACAAACCAATGGGAA
GAAACCAAACCAAGGTTTATGGAGGCAGATACAGTGGCGCATTGTGGAATATCTCTAGAAGGTAATTTTGTCTGGAGTTT
AACCATGACTGATATTTTATTAACTTGGACAGAAAATTGGGCAGTTTGGAACAAAGGGGCATATGGAGTGGGCAATGCCA
TTGATGATGTTGAAGCTAATTTACCTTTTGAAATCAAAGGGTTTGATTGTGACAATGGCTCAGAACTTTTAAATTATTAT
TTGATTCGAAAGTTTGCAGAAAGACCTCAGGAAACAGCGATCCAATTCACTCGTTCCAGACCTTATATGTAG

Upstream 100 bases:

>100_bases
ATTCTGTGATATTGATGATTTTTGCAAGGGGTGGTTTAAAGAAATGTGTCATTATCGTGTTGAATCACATTAAAGGTAAC
CCGAAATTGTGGAGCTAACG

Downstream 100 bases:

>100_bases
TAGTTCAAACTTGATCTGACAGTTAGCGGTTTTTCAAGAAGTGTCTGTCAGGTCAAATTTAGTTTATAAATTTTTCCATC
CAGATTTGTTTATCCTCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MAKRYEKRIDWQRIYHKYRRSNVKKRSLLLNELCDLTGMNRKYLIRKLNKKKVKSSKHRGAKPTYEAEIYLSIIKPIWLA
ADQIRGKRLKEVLQDCLHFYEEEFGDLDEIIRFKVKQISSATLDRLLKPLKANYKGRGISGTKPGTIIKNQIPIKTNQWE
ETKPRFMEADTVAHCGISLEGNFVWSLTMTDILLTWTENWAVWNKGAYGVGNAIDDVEANLPFEIKGFDCDNGSELLNYY
LIRKFAERPQETAIQFTRSRPYM

Sequences:

>Translated_263_residues
MAKRYEKRIDWQRIYHKYRRSNVKKRSLLLNELCDLTGMNRKYLIRKLNKKKVKSSKHRGAKPTYEAEIYLSIIKPIWLA
ADQIRGKRLKEVLQDCLHFYEEEFGDLDEIIRFKVKQISSATLDRLLKPLKANYKGRGISGTKPGTIIKNQIPIKTNQWE
ETKPRFMEADTVAHCGISLEGNFVWSLTMTDILLTWTENWAVWNKGAYGVGNAIDDVEANLPFEIKGFDCDNGSELLNYY
LIRKFAERPQETAIQFTRSRPYM
>Mature_262_residues
AKRYEKRIDWQRIYHKYRRSNVKKRSLLLNELCDLTGMNRKYLIRKLNKKKVKSSKHRGAKPTYEAEIYLSIIKPIWLAA
DQIRGKRLKEVLQDCLHFYEEEFGDLDEIIRFKVKQISSATLDRLLKPLKANYKGRGISGTKPGTIIKNQIPIKTNQWEE
TKPRFMEADTVAHCGISLEGNFVWSLTMTDILLTWTENWAVWNKGAYGVGNAIDDVEANLPFEIKGFDCDNGSELLNYYL
IRKFAERPQETAIQFTRSRPYM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 30817; Mature: 30686

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRYEKRIDWQRIYHKYRRSNVKKRSLLLNELCDLTGMNRKYLIRKLNKKKVKSSKHRG
CCCHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
AKPTYEAEIYLSIIKPIWLAADQIRGKRLKEVLQDCLHFYEEEFGDLDEIIRFKVKQISS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ATLDRLLKPLKANYKGRGISGTKPGTIIKNQIPIKTNQWEETKPRFMEADTVAHCGISLE
HHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEC
GNFVWSLTMTDILLTWTENWAVWNKGAYGVGNAIDDVEANLPFEIKGFDCDNGSELLNYY
CCEEEEEEHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCEEEECCCCCCHHHHHHHH
LIRKFAERPQETAIQFTRSRPYM
HHHHHHHCCHHHHHHHHCCCCCC
>Mature Secondary Structure 
AKRYEKRIDWQRIYHKYRRSNVKKRSLLLNELCDLTGMNRKYLIRKLNKKKVKSSKHRG
CCHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
AKPTYEAEIYLSIIKPIWLAADQIRGKRLKEVLQDCLHFYEEEFGDLDEIIRFKVKQISS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ATLDRLLKPLKANYKGRGISGTKPGTIIKNQIPIKTNQWEETKPRFMEADTVAHCGISLE
HHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEC
GNFVWSLTMTDILLTWTENWAVWNKGAYGVGNAIDDVEANLPFEIKGFDCDNGSELLNYY
CCEEEEEEHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCEEEECCCCCCHHHHHHHH
LIRKFAERPQETAIQFTRSRPYM
HHHHHHHCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]