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The map label for this gene is 148359480

Identifier: 148359480

GI number: 148359480

Start: 2247375

End: 2248169

Strand: Reverse

Name: 148359480

Synonym: LPC_1388

Alternate gene names: NA

Gene position: 2248169-2247375 (Counterclockwise)

Preceding gene: 148359481

Following gene: 148359476

Centisome position: 62.86

GC content: 35.97

Gene sequence:

>795_bases
ATGAATATTCAACATGAGCGTATTTTATCACTATGTGAACGCTTGAATTTATCAGCGATAGCGACAAATTACTCTTATCT
AGCTCAAGAGGCAGCAATTCATAATCAAGGATATAGTGATTTTTTAGAAAGTGTATTGACTGTGGAGTTACAGGAAAAAC
AATATCGAAGTCGAACCCTGCTCACTAAAATGGCTGGTTTTCCAATGATTAAAACAATAGATGATTTTGATTTTAAATTT
GCTTCTGGTGTACCAAAAAATAAAATCCGAGAACTGACTTCTTTGGCTTTCATTGAACGACAGGAAAACATTTTATTACT
TGGTCCTAGTGGATTAGGCAAGACTCATTTAGCGATTGCTCTGGGTTATTTAGCAGTTCAAGCAAACATTAAAACAAAAT
TTATTAGCGCAGCAGATTTGATGTTATTGCTTGAAACAGCTCATCGCCAAGGGCGATATAAAGATATTATGCGACGGGTT
ATTAATAATGCTCGACTGCTCATTATTGATGAAATTGGATATTTACCAATGAACCGAGATCAGGCAAATCATTTCTTCCA
AGTTATTGCAAATCGCTATGAAAAAGGTTCTATTATTGCCACCTCCAATCTCGCTTTTGGTCAATGGGACAATACTTTCG
CCGGCGATAAAGTATTAACAGCAGCTATGCTCGACAGGTTGCTCCATCATGCTCATGTCATTCAATGCAGAGGCGACAGT
TATAGATTAAAAGACAAATTTAAGGCCGGTTTAATTCAAAATCAGAAGGAGGAGCAAAATAATATAACTGATTAA

Upstream 100 bases:

>100_bases
AGGAGGTTCACTATTTTGCCTTTCAATTATTAGACAACACTGCAATGCAACATGAATTGTCAATTTATCAGAAACTACTC
GAGCGCACAGAGGAGGCTGC

Downstream 100 bases:

>100_bases
TTTTTTTACCAGGAGGGATCAATTTTCATCTGGCAAAAGGATCAATTTTCAATCGGCATTGACATTTGCCAGCAAGAATT
GCAATAATGAATGTAGAGAA

Product: transposase/IS protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNIQHERILSLCERLNLSAIATNYSYLAQEAAIHNQGYSDFLESVLTVELQEKQYRSRTLLTKMAGFPMIKTIDDFDFKF
ASGVPKNKIRELTSLAFIERQENILLLGPSGLGKTHLAIALGYLAVQANIKTKFISAADLMLLLETAHRQGRYKDIMRRV
INNARLLIIDEIGYLPMNRDQANHFFQVIANRYEKGSIIATSNLAFGQWDNTFAGDKVLTAAMLDRLLHHAHVIQCRGDS
YRLKDKFKAGLIQNQKEEQNNITD

Sequences:

>Translated_264_residues
MNIQHERILSLCERLNLSAIATNYSYLAQEAAIHNQGYSDFLESVLTVELQEKQYRSRTLLTKMAGFPMIKTIDDFDFKF
ASGVPKNKIRELTSLAFIERQENILLLGPSGLGKTHLAIALGYLAVQANIKTKFISAADLMLLLETAHRQGRYKDIMRRV
INNARLLIIDEIGYLPMNRDQANHFFQVIANRYEKGSIIATSNLAFGQWDNTFAGDKVLTAAMLDRLLHHAHVIQCRGDS
YRLKDKFKAGLIQNQKEEQNNITD
>Mature_264_residues
MNIQHERILSLCERLNLSAIATNYSYLAQEAAIHNQGYSDFLESVLTVELQEKQYRSRTLLTKMAGFPMIKTIDDFDFKF
ASGVPKNKIRELTSLAFIERQENILLLGPSGLGKTHLAIALGYLAVQANIKTKFISAADLMLLLETAHRQGRYKDIMRRV
INNARLLIIDEIGYLPMNRDQANHFFQVIANRYEKGSIIATSNLAFGQWDNTFAGDKVLTAAMLDRLLHHAHVIQCRGDS
YRLKDKFKAGLIQNQKEEQNNITD

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001270
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 30032; Mature: 30032

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIQHERILSLCERLNLSAIATNYSYLAQEAAIHNQGYSDFLESVLTVELQEKQYRSRTL
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LTKMAGFPMIKTIDDFDFKFASGVPKNKIRELTSLAFIERQENILLLGPSGLGKTHLAIA
HHHHHCCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHH
LGYLAVQANIKTKFISAADLMLLLETAHRQGRYKDIMRRVINNARLLIIDEIGYLPMNRD
HHHHHHEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCH
QANHFFQVIANRYEKGSIIATSNLAFGQWDNTFAGDKVLTAAMLDRLLHHAHVIQCRGDS
HHHHHHHHHHHHCCCCCEEEECCCEECCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCC
YRLKDKFKAGLIQNQKEEQNNITD
CCHHHHHHHHHHCCCHHHHCCCCC
>Mature Secondary Structure
MNIQHERILSLCERLNLSAIATNYSYLAQEAAIHNQGYSDFLESVLTVELQEKQYRSRTL
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LTKMAGFPMIKTIDDFDFKFASGVPKNKIRELTSLAFIERQENILLLGPSGLGKTHLAIA
HHHHHCCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHH
LGYLAVQANIKTKFISAADLMLLLETAHRQGRYKDIMRRVINNARLLIIDEIGYLPMNRD
HHHHHHEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCH
QANHFFQVIANRYEKGSIIATSNLAFGQWDNTFAGDKVLTAAMLDRLLHHAHVIQCRGDS
HHHHHHHHHHHHCCCCCEEEECCCEECCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCC
YRLKDKFKAGLIQNQKEEQNNITD
CCHHHHHHHHHHCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8382825 [H]