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The map label for this gene is tnpA [H]

Identifier: 148359476

GI number: 148359476

Start: 2244912

End: 2246087

Strand: Reverse

Name: tnpA [H]

Synonym: LPC_1384

Alternate gene names: 148359476

Gene position: 2246087-2244912 (Counterclockwise)

Preceding gene: 148359480

Following gene: 148359470

Centisome position: 62.8

GC content: 38.78

Gene sequence:

>1176_bases
GTGCCTAGGAAGAATCTTATCCTAAATTTACCTGGATTTTCTATAGTAAAAGTGAGTGGATACCAGCCGTTGTTATTAGA
TGTTTCTTATAATCGATTAGCGCGTTGTGGTCATTGTCAAAGTAAGAAGGTACGCAAGAAATCATCGTATCTGCGAGAAG
TACATCATGAGTTGATAGGTCATAGGCGAAGTATCTTAAGGTTTAAAGCTTATAAGTTATATTGTCATGATTGTGGTCGA
TATGGGAATCAACAGTTTCCCGGCATTAATAAGCATCAACGTGCTACATGGCGTGCGCAGTCAGCAGTATTTCATGAGCA
TAGTCGAGGAGTATCACAAAAAGACCTGTCGGAACGTTATAAGAAAGGGAAAGCGACAATAGAACGCTGGTATCAACGGC
ATTATGAAGAGCAAAATAGGGAATTACTCAATCGTCCATGCCCGATAGTACTCGGTATTGATGAGCATTTCTTTAGTAAA
AAAGAAGGCTTTGCTACAACGTTCTGTGACCTAAGAAAACATAAGGTATTTGATGTGGTTCGTGGCCGTCGTGAGAAAGA
ATTAAAAGAATATCTCCAGCAATTACCTGGAAAAGAGCGTGTTAAAGTGATTTGTATGGACTTAAGTAGTACGTACCGTT
CCTTAGTAAAGAAGTACTTTCCAAATGCGATGATAGTGGCTGATAGGTTTCATGTAATCCGTTTAATTCAACACCAGTGT
ATGATGACCTGTCGAGAACTCTCCAGTGAAATTAAAAACAATAGAGGTATCTTAGCCTTATTGAGAACGAGACCTGATAA
CTTAAGTGATGAGAAGAAAGTCAAAAGAGATACATTTTTCACTGAAAATCCGGCAATAGAATCCATTTATCAATTTCAGC
AACAACTGCACTCACTATTAATGAAAAGGGCGTTAACGCAGCATGAGTGTCGTAAAGTAATACCTACTTTTTTAGATATG
CTTTCTGAGTTAAAGCAAAGTGGATTTAAAGCGTTAGCCTCATTAGGCAGAACGCTCTGTGCTTGGAAAGATGAGGTCGC
CAGAATGTGGCGGTTTAGTAAATCTAATGGAATAACTGAAGGCTTTCATCGCAAAATGAAACTCATTCAGCGAAGGGCTT
ATGGTTTTAGAAATTTTGAAAATTATAGAGTTCGTGTTAGGGTGCTCTGCGGGTGA

Upstream 100 bases:

>100_bases
CAAAAACTGTGAATAATGGGCTCTACACCAATTAAGGGGGCACTTTAATCAAATTAGTCTAGACTAAATCCTTGATTTTG
CGATCAAAAAGGAGATTAAA

Downstream 100 bases:

>100_bases
TTAAAGACTGCCCCCTTAAATGGGAAAGAGCCACTCATTCAGCGAAGGGCTTATGGTTTTAGAAATTTTGAAAATTATAG
AGTGCGTGTTAGGGTGCTCT

Product: TnpA transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MPRKNLILNLPGFSIVKVSGYQPLLLDVSYNRLARCGHCQSKKVRKKSSYLREVHHELIGHRRSILRFKAYKLYCHDCGR
YGNQQFPGINKHQRATWRAQSAVFHEHSRGVSQKDLSERYKKGKATIERWYQRHYEEQNRELLNRPCPIVLGIDEHFFSK
KEGFATTFCDLRKHKVFDVVRGRREKELKEYLQQLPGKERVKVICMDLSSTYRSLVKKYFPNAMIVADRFHVIRLIQHQC
MMTCRELSSEIKNNRGILALLRTRPDNLSDEKKVKRDTFFTENPAIESIYQFQQQLHSLLMKRALTQHECRKVIPTFLDM
LSELKQSGFKALASLGRTLCAWKDEVARMWRFSKSNGITEGFHRKMKLIQRRAYGFRNFENYRVRVRVLCG

Sequences:

>Translated_391_residues
MPRKNLILNLPGFSIVKVSGYQPLLLDVSYNRLARCGHCQSKKVRKKSSYLREVHHELIGHRRSILRFKAYKLYCHDCGR
YGNQQFPGINKHQRATWRAQSAVFHEHSRGVSQKDLSERYKKGKATIERWYQRHYEEQNRELLNRPCPIVLGIDEHFFSK
KEGFATTFCDLRKHKVFDVVRGRREKELKEYLQQLPGKERVKVICMDLSSTYRSLVKKYFPNAMIVADRFHVIRLIQHQC
MMTCRELSSEIKNNRGILALLRTRPDNLSDEKKVKRDTFFTENPAIESIYQFQQQLHSLLMKRALTQHECRKVIPTFLDM
LSELKQSGFKALASLGRTLCAWKDEVARMWRFSKSNGITEGFHRKMKLIQRRAYGFRNFENYRVRVRVLCG
>Mature_390_residues
PRKNLILNLPGFSIVKVSGYQPLLLDVSYNRLARCGHCQSKKVRKKSSYLREVHHELIGHRRSILRFKAYKLYCHDCGRY
GNQQFPGINKHQRATWRAQSAVFHEHSRGVSQKDLSERYKKGKATIERWYQRHYEEQNRELLNRPCPIVLGIDEHFFSKK
EGFATTFCDLRKHKVFDVVRGRREKELKEYLQQLPGKERVKVICMDLSSTYRSLVKKYFPNAMIVADRFHVIRLIQHQCM
MTCRELSSEIKNNRGILALLRTRPDNLSDEKKVKRDTFFTENPAIESIYQFQQQLHSLLMKRALTQHECRKVIPTFLDML
SELKQSGFKALASLGRTLCAWKDEVARMWRFSKSNGITEGFHRKMKLIQRRAYGFRNFENYRVRVRVLCG

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 46336; Mature: 46204

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRKNLILNLPGFSIVKVSGYQPLLLDVSYNRLARCGHCQSKKVRKKSSYLREVHHELIG
CCCCCEEEECCCCEEEEECCCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
HRRSILRFKAYKLYCHDCGRYGNQQFPGINKHQRATWRAQSAVFHEHSRGVSQKDLSERY
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KKGKATIERWYQRHYEEQNRELLNRPCPIVLGIDEHFFSKKEGFATTFCDLRKHKVFDVV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHH
RGRREKELKEYLQQLPGKERVKVICMDLSSTYRSLVKKYFPNAMIVADRFHVIRLIQHQC
HCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH
MMTCRELSSEIKNNRGILALLRTRPDNLSDEKKVKRDTFFTENPAIESIYQFQQQLHSLL
HHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
MKRALTQHECRKVIPTFLDMLSELKQSGFKALASLGRTLCAWKDEVARMWRFSKSNGITE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
GFHRKMKLIQRRAYGFRNFENYRVRVRVLCG
HHHHHHHHHHHHHHCCCCCCCCEEEEEEECC
>Mature Secondary Structure 
PRKNLILNLPGFSIVKVSGYQPLLLDVSYNRLARCGHCQSKKVRKKSSYLREVHHELIG
CCCCEEEECCCCEEEEECCCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
HRRSILRFKAYKLYCHDCGRYGNQQFPGINKHQRATWRAQSAVFHEHSRGVSQKDLSERY
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KKGKATIERWYQRHYEEQNRELLNRPCPIVLGIDEHFFSKKEGFATTFCDLRKHKVFDVV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHH
RGRREKELKEYLQQLPGKERVKVICMDLSSTYRSLVKKYFPNAMIVADRFHVIRLIQHQC
HCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH
MMTCRELSSEIKNNRGILALLRTRPDNLSDEKKVKRDTFFTENPAIESIYQFQQQLHSLL
HHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
MKRALTQHECRKVIPTFLDMLSELKQSGFKALASLGRTLCAWKDEVARMWRFSKSNGITE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
GFHRKMKLIQRRAYGFRNFENYRVRVRVLCG
HHHHHHHHHHHHHHCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]