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The map label for this gene is skgA [H]

Identifier: 148359147

GI number: 148359147

Start: 1847034

End: 1847786

Strand: Reverse

Name: skgA [H]

Synonym: LPC_1039

Alternate gene names: 148359147

Gene position: 1847786-1847034 (Counterclockwise)

Preceding gene: 148359148

Following gene: 148359146

Centisome position: 51.67

GC content: 35.86

Gene sequence:

>753_bases
ATGGCTTATACGGTAAAACAATTAGCAAAAATATCGAATGTAAGTGTGCGCACTTTACATTGGTATGATGAAATAGGCTT
ATTAAAACCAGCCTATCAAGGTGCTAATGGCTATCGTTATTATGAAGAAAAGCAGTGCTTAAAATTACAGCAAATTTTAT
TCTTCAGAGAGCTGGGATTCCCCTTGAATGATATTCAAAAACTGCTTATGCAAGATGATTTTGACCATATCAAAGCATTG
AGAGCGCATAAACAGGTTTTGGAAAGCGATATCAATCGAAAAAATCAATTGATTGTAACGATTGATAAAACCATTCAACA
TTTAAGAGGTAAGCATAAGATGTCTAATGAAGAATTATATTATGGTTTTGATTCACTGCGACAAAAACAATACGAAAAGG
AATTAGTTAAAGAAGGGGTGGTCAGCCAGGATTGGATGAATAACTACAAGAAAAAAATTAGTCAATGGACTCAGGCTGAT
AAAGACCGATTTATTCAGGAAGGTAAAGACATCAATCAAGCACTGATTTCGGCTATTAATAATCAACTTAAGCCTGCTTC
TCCAGAAGTACAATCCATTATCCATAGGCATCATGCTTGGGTAGGCTGGAACCCAAACAAGGAAGGGTATATTGGGCTAA
GCCAAAGATATTTGACTCCTGAGTTTAGAAAGTTTTATGAGCGGCAGCATCCTGATCTGCTCGAATTCATTATTGAAGGG
ATGCTGTTTTATGCAAACAAGAACCTTGATTAA

Upstream 100 bases:

>100_bases
ATTTCATTTTATGGTTTACAAAAAAATTAAGATGAAATGCTTGACCCTTACGTTACGTGAGCACTTATCTTTAAATGGAA
TCATTTGAGAGGACAGTTTA

Downstream 100 bases:

>100_bases
GCTGAGAGAAGGGCTGTGTCTTATCAGCCCTAAATGATATTGGATTGGGAGCATTGTGCGTGTTAGCAGAAATAATACTG
ATTTATACATGCCAGCTTAT

Product: mercury resistance transcriptional regulator SkgA

Products: NA

Alternate protein names: Stationary-phase regulation of katG protein [H]

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MAYTVKQLAKISNVSVRTLHWYDEIGLLKPAYQGANGYRYYEEKQCLKLQQILFFRELGFPLNDIQKLLMQDDFDHIKAL
RAHKQVLESDINRKNQLIVTIDKTIQHLRGKHKMSNEELYYGFDSLRQKQYEKELVKEGVVSQDWMNNYKKKISQWTQAD
KDRFIQEGKDINQALISAINNQLKPASPEVQSIIHRHHAWVGWNPNKEGYIGLSQRYLTPEFRKFYERQHPDLLEFIIEG
MLFYANKNLD

Sequences:

>Translated_250_residues
MAYTVKQLAKISNVSVRTLHWYDEIGLLKPAYQGANGYRYYEEKQCLKLQQILFFRELGFPLNDIQKLLMQDDFDHIKAL
RAHKQVLESDINRKNQLIVTIDKTIQHLRGKHKMSNEELYYGFDSLRQKQYEKELVKEGVVSQDWMNNYKKKISQWTQAD
KDRFIQEGKDINQALISAINNQLKPASPEVQSIIHRHHAWVGWNPNKEGYIGLSQRYLTPEFRKFYERQHPDLLEFIIEG
MLFYANKNLD
>Mature_249_residues
AYTVKQLAKISNVSVRTLHWYDEIGLLKPAYQGANGYRYYEEKQCLKLQQILFFRELGFPLNDIQKLLMQDDFDHIKALR
AHKQVLESDINRKNQLIVTIDKTIQHLRGKHKMSNEELYYGFDSLRQKQYEKELVKEGVVSQDWMNNYKKKISQWTQADK
DRFIQEGKDINQALISAINNQLKPASPEVQSIIHRHHAWVGWNPNKEGYIGLSQRYLTPEFRKFYERQHPDLLEFIIEGM
LFYANKNLD

Specific function: Regulates the induction of katG (catalase-peroxidase) in stationary phase [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR012925 [H]

Pfam domain/function: PF00376 MerR; PF07739 TipAS [H]

EC number: NA

Molecular weight: Translated: 29723; Mature: 29592

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYTVKQLAKISNVSVRTLHWYDEIGLLKPAYQGANGYRYYEEKQCLKLQQILFFRELGF
CCCHHHHHHHHHCCCEEEEEHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PLNDIQKLLMQDDFDHIKALRAHKQVLESDINRKNQLIVTIDKTIQHLRGKHKMSNEELY
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCHHE
YGFDSLRQKQYEKELVKEGVVSQDWMNNYKKKISQWTQADKDRFIQEGKDINQALISAIN
ECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
NQLKPASPEVQSIIHRHHAWVGWNPNKEGYIGLSQRYLTPEFRKFYERQHPDLLEFIIEG
HCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHH
MLFYANKNLD
HHHHHCCCCC
>Mature Secondary Structure 
AYTVKQLAKISNVSVRTLHWYDEIGLLKPAYQGANGYRYYEEKQCLKLQQILFFRELGF
CCHHHHHHHHHCCCEEEEEHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PLNDIQKLLMQDDFDHIKALRAHKQVLESDINRKNQLIVTIDKTIQHLRGKHKMSNEELY
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCHHE
YGFDSLRQKQYEKELVKEGVVSQDWMNNYKKKISQWTQADKDRFIQEGKDINQALISAIN
ECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
NQLKPASPEVQSIIHRHHAWVGWNPNKEGYIGLSQRYLTPEFRKFYERQHPDLLEFIIEG
HCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHH
MLFYANKNLD
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10498730 [H]