Definition | Staphylococcus aureus subsp. aureus JH9, complete genome. |
---|---|
Accession | NC_009487 |
Length | 2,906,700 |
Click here to switch to the map view.
The map label for this gene is 148267437
Identifier: 148267437
GI number: 148267437
Start: 1056959
End: 1057306
Strand: Direct
Name: 148267437
Synonym: SaurJH9_1003
Alternate gene names: NA
Gene position: 1056959-1057306 (Clockwise)
Preceding gene: 148267433
Following gene: 148267438
Centisome position: 36.36
GC content: 29.02
Gene sequence:
>348_bases ATGCGTTTATATATTAATGAAATTAAAATTAAAGATGACATACTTTATTGTTATACAGAAGATTCTATTAAAGGATTATC TGAAGTAGGACAAATGCTCGTTGATAGTGATAATTATGCCTTTGCGTATACATTAGATGATGGTAAAGCGTATGCTTATC TCATTTTCGTACAAGAAACATGGACGATGTTGCATGAAAACACGACTAAAAAAATTATTATCAATGATGAACTAGAATTG ACTGAATTCCACCAAGAACTTACTTATATTTTAGACAACATAAAAGGGAATAATAATTATGGTAAGGAATTTGTTGCAAC CGTTGAAGAAACATTCGACATTGAATAA
Upstream 100 bases:
>100_bases TCTATTATCAATGTTAATTTGACCATTAAAAATAGTGTTCGTAAGTGTTTTGTATTATTGAATTGTGTTAAAATGTTATG GAATAAGAGGAGGATTAAGC
Downstream 100 bases:
>100_bases AGCGGGGTGAAGCACTATGAATCAATGGGATCAGTTCTTAACACCTTATAAGCAAGCGGTTGATGAGTTGAAAGTGAAAC TTAAAGGCATGCGCAAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MRLYINEIKIKDDILYCYTEDSIKGLSEVGQMLVDSDNYAFAYTLDDGKAYAYLIFVQETWTMLHENTTKKIIINDELEL TEFHQELTYILDNIKGNNNYGKEFVATVEETFDIE
Sequences:
>Translated_115_residues MRLYINEIKIKDDILYCYTEDSIKGLSEVGQMLVDSDNYAFAYTLDDGKAYAYLIFVQETWTMLHENTTKKIIINDELEL TEFHQELTYILDNIKGNNNYGKEFVATVEETFDIE >Mature_115_residues MRLYINEIKIKDDILYCYTEDSIKGLSEVGQMLVDSDNYAFAYTLDDGKAYAYLIFVQETWTMLHENTTKKIIINDELEL TEFHQELTYILDNIKGNNNYGKEFVATVEETFDIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0738 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1003_STAA9 (A5IRI1)
Other databases:
- EMBL: CP000703 - RefSeq: YP_001246380.1 - STRING: A5IRI1 - EnsemblBacteria: EBSTAT00000018408 - GeneID: 5167858 - GenomeReviews: CP000703_GR - KEGG: saj:SaurJH9_1003 - eggNOG: NOG09330 - GeneTree: EBGT00050000025422 - HOGENOM: HBG535582 - OMA: LDDGQSY - ProtClustDB: CLSK873443 - BioCyc: SAUR359786:SAURJH9_1003-MONOMER - HAMAP: MF_01861 - InterPro: IPR020908
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13499; Mature: 13499
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLYINEIKIKDDILYCYTEDSIKGLSEVGQMLVDSDNYAFAYTLDDGKAYAYLIFVQET CEEEEEEEEEECCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEEECH WTMLHENTTKKIIINDELELTEFHQELTYILDNIKGNNNYGKEFVATVEETFDIE HHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MRLYINEIKIKDDILYCYTEDSIKGLSEVGQMLVDSDNYAFAYTLDDGKAYAYLIFVQET CEEEEEEEEEECCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEEECH WTMLHENTTKKIIINDELELTEFHQELTYILDNIKGNNNYGKEFVATVEETFDIE HHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA